Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0524 ATGATCGAGGAAGAGAAGGATCAGGAGATCTCTGATGAGGAAGAGATCAATATGAGCCAAAAGCCGACTTCATCTTACTCAGAGCTCTGCGAAAGAAAATCTAAGATTATAATTAAAGAAGCTTCAGTTTCAGCTCTAGGTCAATGTTCAGGTTCAGCTTCAGTTCGAGTTTGTGATTTCTGTGGAAAAAAGTTCAGTTCTGGAAAAGCCCTAGGAGGCCATAGAAGATATCACATCCAAGCTCTGAGAAAGATGGAGGCTCAGAATCAGGCTCAACAGCAACAAGAAAAGGTCAATTATACACTTAGAATCAAGTCGAAGGATTTGGTCATCCCCGATAATGATGATAATAATAATCTCATCAAATCGAATATTGGGAATCTCAACTCTTCTTCTTTGAGATGTTTCCCATGCCGTGTGTGCGACAAGGATTTTCCATCGAAGAAGTCACTGTACGGGCATATGAGATCTCATCCTGATAGAGATTGGAGAGGTATGGAGCCTCCTTTCACTACTACTGATAGCACTCAAGCTTCTTCAGAAGAGTTTATGAAAGTACAAGATAATGGGTCTTCATCTTCAACTTCAGAAGAATCATTATCAGTACCGGTTGATGTTTCTTCATCTTGTTCTGAAAGCTGGCTCAAGAAAGATAAGAGAGGAAGAAAAAGCATTGGAGAAGCAGAAGCTGCTCATATTGCAGCTCAAACCCTTATGCGTATGCATCTCTATGGTAACTCCCACCTTCATCATCGTCTTCCTCCTCGCGACGAGCCTACTCCTGAAGCAGCTGCACTATTACCGGTCAAGAAAAGGAAGAACAATGTCATGAAGAACCATGATTGCAAGGAGAAAATAGAGAGTAGAGATGGGAATGAAGAATTGGAAGCTCAGAATAATATAGTGGATATGAAAGTGATCAGCATAGTCAAAGAGAAGAAGCTCAATAATAAGAAGATGAAATTAGGTCCAGATATGATCAAGTCAGAAGAAGAAACTGTGAAGCAAGAAGAAGTGAAGCCATCACAAAGCTATGTATGTGACGTCTGTAATAAATCTTTCACATGTTTTCAAGCTTTAGGAGGACACAAAACCAAACACAGGAAGAACATAGTTAAAAGCACCAAGGGCAAGGAAGTGGTGGAACAAAGACAAGAAGAAGAAAAAGTGGAAGAAGAAGACAAGATTTGCACTAATGGATCTTTATTGTCAGCTGCAGGATTAAGTGGTGAAGAAGGAACGGCTCTGGTTAGTAGTGAAGAGAGATTAGCAAAAAATTCTAATGATAATGAGAATAACATCAGTAACGAGGAGGAGGTGGGAGAGGCAAGACAACAATCTGGTTCGAAAATAATGGATTTTGATCTGAATGTGCCTTATGTTTTGGAGCACGAAGCAACTGATCTATAA 1410 0.4 MIEEEKDQEISDEEEINMSQKPTSSYSELCERKSKIIIKEASVSALGQCSGSASVRVCDFCGKKFSSGKALGGHRRYHIQALRKMEAQNQAQQQQEKVNYTLRIKSKDLVIPDNDDNNNLIKSNIGNLNSSSLRCFPCRVCDKDFPSKKSLYGHMRSHPDRDWRGMEPPFTTTDSTQASSEEFMKVQDNGSSSSTSEESLSVPVDVSSSCSESWLKKDKRGRKSIGEAEAAHIAAQTLMRMHLYGNSHLHHRLPPRDEPTPEAAALLPVKKRKNNVMKNHDCKEKIESRDGNEELEAQNNIVDMKVISIVKEKKLNNKKMKLGPDMIKSEEETVKQEEVKPSQSYVCDVCNKSFTCFQALGGHKTKHRKNIVKSTKGKEVVEQRQEEEKVEEEDKICTNGSLLSAAGLSGEEGTALVSSEERLAKNSNDNENNISNEEEVGEARQQSGSKIMDFDLNVPYVLEHEATDL 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0524 469 MobiDBLite consensus disorder prediction 420 442 - -
Alju07g0524 469 SUPERFAMILY beta-beta-alpha zinc fingers 134 367 IPR036236 -
Alju07g0524 469 MobiDBLite consensus disorder prediction 1 27 - -
Alju07g0524 469 MobiDBLite consensus disorder prediction 151 180 - -
Alju07g0524 469 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 28 95 IPR044653 GO:0003700
Alju07g0524 469 ProSiteProfiles Zinc finger C2H2 type domain profile. 345 367 IPR013087 -
Alju07g0524 469 MobiDBLite consensus disorder prediction 185 204 - -
Alju07g0524 469 Gene3D Classic Zinc Finger 55 110 - -
Alju07g0524 469 Gene3D Classic Zinc Finger 116 198 - -
Alju07g0524 469 MobiDBLite consensus disorder prediction 408 449 - -
Alju07g0524 469 Pfam C2H2-type zinc finger 56 78 - -
Alju07g0524 469 Pfam C2H2-type zinc finger 136 160 - -
Alju07g0524 469 Pfam C2H2-type zinc finger 345 369 - -
Alju07g0524 469 ProSitePatterns Zinc finger C2H2 type domain signature. 347 367 IPR013087 -
Alju07g0524 469 SMART c2h2final6 136 158 IPR013087 -
Alju07g0524 469 SMART c2h2final6 345 367 IPR013087 -
Alju07g0524 469 SMART c2h2final6 56 78 IPR013087 -
Alju07g0524 469 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 78 IPR013087 -
Alju07g0524 469 ProSitePatterns Zinc finger C2H2 type domain signature. 138 158 IPR013087 -
Alju07g0524 469 ProSiteProfiles Zinc finger C2H2 type domain profile. 136 163 IPR013087 -
Alju07g0524 469 MobiDBLite consensus disorder prediction 151 167 - -
Alju07g0524 469 ProSitePatterns Zinc finger C2H2 type domain signature. 58 78 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0524 Alju-ChrAlju07 7262401 7263810 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0524 57 169 C2H2 Transcription Factor Family AT2G26940 34.513 3.46e-12 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju07g0524 zf-C2H2_6 3.4e-09 CL0361