Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0523 ATGATGGAGGACAAGAAGGAGAACAGAGGGTTCGATCAAGAATCCTTCGACGCGGAGTTAGAGAAGGTGAGCAAAAAGCCGTTTTTGACTTACTCAGAGCTCCACGAAGGAAAATCTAAGATTAAAATTAATAGAGCTTCAGATTCAGGATCAGGTTCATCCGTACGAATTTGTGATTTTTGTGGAAAACAGTTCAGTTCTGGTAAAGCCCTAGGAGGCCACAGGAGACATCACATCCAAGCTCAGAAAAAAATGAAAGCTCAGAATCTAGCTCGTCAAAATCACGACAACAAAAATAATAATGGTTCTTCATCTTCAACCTTAGAAGAATCATCTTCAGTAGCAGTTGATCTTTCTTCATCTCGTGGAAAACAAAGCTCGAAATTAGAGGCTAGAGATGGGAATGAAGAATTGGAAGCGGATATGAAAGCTTTAGGAGGACACAAAACCAAACACAACAGAGAGAAGAACAGAGTTAAAGGCACGAAGGGCAAGGAAGTAGTGAAACAAAGACAAGAAGAAGAAGAAGAAGAAGAAGACGACAAGGTTTGCATCAGTGGAGCTCTATTGTCAAGTGCAGGGTTGAGTGGTGAAGAAGAAGGAACGCCTCTGATTAGTACTGAAGAGAGATTAGTAATAAGTTCGAATGATAGTGAGAATAACAGTAACGAAGAGGAAGTGGCCGGGAGAGGCAAGTCAACAATCTGGTTGGAAAATAAGGGGTTTTGA 729 0.4115 MMEDKKENRGFDQESFDAELEKVSKKPFLTYSELHEGKSKIKINRASDSGSGSSVRICDFCGKQFSSGKALGGHRRHHIQAQKKMKAQNLARQNHDNKNNNGSSSSTLEESSSVAVDLSSSRGKQSSKLEARDGNEELEADMKALGGHKTKHNREKNRVKGTKGKEVVKQRQEEEEEEEDDKVCISGALLSSAGLSGEEEGTPLISTEERLVISSNDSENNSNEEEVAGRGKSTIWLENKGF 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0523 242 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 83 IPR013087 -
Alju07g0523 242 Pfam C2H2-type zinc finger 55 78 - -
Alju07g0523 242 MobiDBLite consensus disorder prediction 86 125 - -
Alju07g0523 242 SUPERFAMILY beta-beta-alpha zinc fingers 55 81 IPR036236 -
Alju07g0523 242 MobiDBLite consensus disorder prediction 208 222 - -
Alju07g0523 242 MobiDBLite consensus disorder prediction 126 148 - -
Alju07g0523 242 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 40 178 IPR044653 GO:0003700
Alju07g0523 242 Gene3D Classic Zinc Finger 35 115 - -
Alju07g0523 242 ProSitePatterns Zinc finger C2H2 type domain signature. 58 78 IPR013087 -
Alju07g0523 242 MobiDBLite consensus disorder prediction 68 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0523 Alju-ChrAlju07 7236795 7237914 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0523 43 90 C2H2 Transcription Factor Family AT3G53820 44.000 2.92e-06 43.9