Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0514 ATGTCAAGTGGACCAACACATTGGTGTTATGAGTGTGGACATCCAGTTGCAATTGAAGGCGGAGAGGTCATCTGCCCTTACTGTCATGAAGGCTTTGTGCAAGAGCTCAATGAGAGGCATGAGTTTCAAGCATATAATGCCCTTGAAGAGTTTCATCATATGCCTGGTTTTTTTGATGCCGTACATGCCTTTATGGCGCAAAGAGCTTCTGAACCAAGCTTTGGGCTCATAGATGCTTTTGACAATTTCATGAGGCAGAGAATAGCTGGGCAATACCCCAACATTGATGTTAGACAAATGTCTGATAACGCCCAATTTCCTGAATGGAGTCAAGATTTTTTCAATTCTGGCCCCTCTTTGATGTTTCATGGTACTGGAGGGGAGCCTAGGCCAATTAATTTTGGTGGTTTATTGATGGCCCCTGGACTGGAAGCATTTATTCAACAGCTCACCATGAATGATCATAGAGGTCCTCCTCCAGCCTCACATTCATCCATTGATGCAATGCCTACCATTAAGATCACACGAGCGCATCTTCGCTCTGATTCACACTGTCCGGTCTGTCAAGAAAAATTCGAGCTTGGCTCTGAGGCTAGGCAAATGCCCTGTAACCATATTTATCACTCAGATTGTATTGTTCCTTGGTTGGTTCAGCATAACTCTTGTCCTGTTTGCCGTGTTGAGTTGCAGCCTCCAGGACAGGGTAGTTCCCGTGGTGGTAGCAACAATAACCGTGATGGCCCGAGGAGACTGAACCAGGGAAGCAGAAATCCACGATCAACTTGGTGGCCGTTTTGA 798 0.4599 MSSGPTHWCYECGHPVAIEGGEVICPYCHEGFVQELNERHEFQAYNALEEFHHMPGFFDAVHAFMAQRASEPSFGLIDAFDNFMRQRIAGQYPNIDVRQMSDNAQFPEWSQDFFNSGPSLMFHGTGGEPRPINFGGLLMAPGLEAFIQQLTMNDHRGPPPASHSSIDAMPTIKITRAHLRSDSHCPVCQEKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRVELQPPGQGSSRGGSNNNRDGPRRLNQGSRNPRSTWWPF 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0514 265 Pfam Ring finger domain 184 226 IPR001841 -
Alju07g0514 265 SUPERFAMILY RING/U-box 165 232 - -
Alju07g0514 265 MobiDBLite consensus disorder prediction 234 265 - -
Alju07g0514 265 Pfam zinc-ribbon 6 36 IPR039525 GO:0061630
Alju07g0514 265 ProSiteProfiles Zinc finger RING-type profile. 185 226 IPR001841 -
Alju07g0514 265 SMART ring_2 185 225 IPR001841 -
Alju07g0514 265 FunFam E3 ubiquitin-protein ligase RING1-like 148 232 - -
Alju07g0514 265 CDD RING-H2_RNF126-like 185 226 - -
Alju07g0514 265 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 87 229 - -
Alju07g0514 265 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 147 232 IPR013083 -
Alju07g0514 265 MobiDBLite consensus disorder prediction 229 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0514 Alju-ChrAlju07 7124097 7124894 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0514 129 242 C3H Transcription Factor Family AT5G01980 39.655 3.62e-23 96.3