Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju07g0514 | ATGTCAAGTGGACCAACACATTGGTGTTATGAGTGTGGACATCCAGTTGCAATTGAAGGCGGAGAGGTCATCTGCCCTTACTGTCATGAAGGCTTTGTGCAAGAGCTCAATGAGAGGCATGAGTTTCAAGCATATAATGCCCTTGAAGAGTTTCATCATATGCCTGGTTTTTTTGATGCCGTACATGCCTTTATGGCGCAAAGAGCTTCTGAACCAAGCTTTGGGCTCATAGATGCTTTTGACAATTTCATGAGGCAGAGAATAGCTGGGCAATACCCCAACATTGATGTTAGACAAATGTCTGATAACGCCCAATTTCCTGAATGGAGTCAAGATTTTTTCAATTCTGGCCCCTCTTTGATGTTTCATGGTACTGGAGGGGAGCCTAGGCCAATTAATTTTGGTGGTTTATTGATGGCCCCTGGACTGGAAGCATTTATTCAACAGCTCACCATGAATGATCATAGAGGTCCTCCTCCAGCCTCACATTCATCCATTGATGCAATGCCTACCATTAAGATCACACGAGCGCATCTTCGCTCTGATTCACACTGTCCGGTCTGTCAAGAAAAATTCGAGCTTGGCTCTGAGGCTAGGCAAATGCCCTGTAACCATATTTATCACTCAGATTGTATTGTTCCTTGGTTGGTTCAGCATAACTCTTGTCCTGTTTGCCGTGTTGAGTTGCAGCCTCCAGGACAGGGTAGTTCCCGTGGTGGTAGCAACAATAACCGTGATGGCCCGAGGAGACTGAACCAGGGAAGCAGAAATCCACGATCAACTTGGTGGCCGTTTTGA | 798 | 0.4599 | MSSGPTHWCYECGHPVAIEGGEVICPYCHEGFVQELNERHEFQAYNALEEFHHMPGFFDAVHAFMAQRASEPSFGLIDAFDNFMRQRIAGQYPNIDVRQMSDNAQFPEWSQDFFNSGPSLMFHGTGGEPRPINFGGLLMAPGLEAFIQQLTMNDHRGPPPASHSSIDAMPTIKITRAHLRSDSHCPVCQEKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRVELQPPGQGSSRGGSNNNRDGPRRLNQGSRNPRSTWWPF | 265 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju07g0514 | 265 | Pfam | Ring finger domain | 184 | 226 | IPR001841 | - | |
Alju07g0514 | 265 | SUPERFAMILY | RING/U-box | 165 | 232 | - | - | |
Alju07g0514 | 265 | MobiDBLite | consensus disorder prediction | 234 | 265 | - | - | |
Alju07g0514 | 265 | Pfam | zinc-ribbon | 6 | 36 | IPR039525 | GO:0061630 | |
Alju07g0514 | 265 | ProSiteProfiles | Zinc finger RING-type profile. | 185 | 226 | IPR001841 | - | |
Alju07g0514 | 265 | SMART | ring_2 | 185 | 225 | IPR001841 | - | |
Alju07g0514 | 265 | FunFam | E3 ubiquitin-protein ligase RING1-like | 148 | 232 | - | - | |
Alju07g0514 | 265 | CDD | RING-H2_RNF126-like | 185 | 226 | - | - | |
Alju07g0514 | 265 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 87 | 229 | - | - | |
Alju07g0514 | 265 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 147 | 232 | IPR013083 | - | |
Alju07g0514 | 265 | MobiDBLite | consensus disorder prediction | 229 | 265 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju07g0514 | Alju-ChrAlju07 | 7124097 | 7124894 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju07g0514 | 129 | 242 | C3H Transcription Factor Family | AT5G01980 | 39.655 | 3.62e-23 | 96.3 |