Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0457 ATGGCATTCACAGTAGAGAGGTGCGACGAGATAGAGAAGATGGCGGCGATGGTGTTCATGGATGAGAAGTCTTCAGCGACGACGGCGTCGACGCCGGTGCCGGCACCATTCCTGTCAAAGACGTATCAGCTGGTGGATGACCCTGTCACCGACCACATTGTCTCTTGGGGTTCCGATGAGTCCTCTTTTGTGGTGTGGAGACCTCCTGAGTTTTCCAGAGATCTCCTTCCCAACTACTTCAAGCACAACAACTTCTCCAGCTTCGTTCGCCAGCTCAATACTTATGGTTTCAAGAAGGTAGTAGCAGATAGGTGGGAATTTGCAAATGAGTACTTCAGAAAAGGAGCTAAGCATCTTCTTTGTGAAATCCACAGAAGAAAAAGCCCTCACAATCACCACCATCTCCATGAACAGCCAACACCTCAAAATTTCTTTTGGAACACAGAAACTACTTGTAGTCCATTATCAATGCCATCAGTTTATTCTTCTCCCACTAAACCTGCAACAACAACAACAAGAATATCAGGAGTATCTTCAGGAAGCAGTAATACTACTCATGAAGTTCTAAGAGCACTTTCAGAAGACAATCAGAGACTGAGGAGGAAGAATTTGATGCTGTTATCAGAACTCACTCACATGAAGACTCTATACAATGACATTATCTACTTCATACAGAACCATGTCAAACCAGTGTACAATAATAATAATGATCATATTCCCAAGCTGGTTGAATTGGATTCATCATCAATCTCACTTGATCATCATCAGACTCAAATTGATGGTGCTAATAAGTTGGATGATTCATCAGCTGCTGGTTCTTCTGTGAAGCTATTTGGGGTCCCACTTAGTAGCAGAAAGAGGTTGCATTCTGAATATATGGGTGAAGAAGAAGAATTTGTTGAGTGTGTTAATTAA 915 0.4251 MAFTVERCDEIEKMAAMVFMDEKSSATTASTPVPAPFLSKTYQLVDDPVTDHIVSWGSDESSFVVWRPPEFSRDLLPNYFKHNNFSSFVRQLNTYGFKKVVADRWEFANEYFRKGAKHLLCEIHRRKSPHNHHHLHEQPTPQNFFWNTETTCSPLSMPSVYSSPTKPATTTTRISGVSSGSSNTTHEVLRALSEDNQRLRRKNLMLLSELTHMKTLYNDIIYFIQNHVKPVYNNNNDHIPKLVELDSSSISLDHHQTQIDGANKLDDSSAAGSSVKLFGVPLSSRKRLHSEYMGEEEEFVECVN 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0457 304 SMART hsfneu3 33 126 IPR000232 GO:0003700|GO:0006355|GO:0043565
Alju07g0457 304 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 30 267 IPR027725 -
Alju07g0457 304 Pfam HSF-type DNA-binding 37 126 IPR000232 GO:0003700|GO:0006355|GO:0043565
Alju07g0457 304 SUPERFAMILY "Winged helix" DNA-binding domain 34 126 IPR036390 -
Alju07g0457 304 ProSitePatterns HSF-type DNA-binding domain signature. 76 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Alju07g0457 304 Gene3D - 30 127 IPR036388 -
Alju07g0457 304 MobiDBLite consensus disorder prediction 157 183 - -
Alju07g0457 304 Coils Coil 189 209 - -
Alju07g0457 304 PRINTS Heat shock factor (HSF) domain signature 75 87 IPR000232 GO:0003700|GO:0006355|GO:0043565
Alju07g0457 304 PRINTS Heat shock factor (HSF) domain signature 88 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Alju07g0457 304 PRINTS Heat shock factor (HSF) domain signature 37 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Alju07g0457 304 FunFam Heat stress transcription factor B-4 29 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0457 Alju-ChrAlju07 5701710 5703298 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0457 33 289 HSF AT1G46264 49.169 2.14e-84 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Alju07g0457 HSF_DNA-bind 3.2e-32 CL0123