Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0451 ATGGGCAACTGCTACTCCGGCAAGGGCAACGACGCCCCCTCAACCGACAATGATAACAACAACAAGGGAGGAGAAGCAACTACTGACAACCAACAAAACAATATCATCAACAACACAAGACAAGAAACACCCACCTCTTCCAAACCTTCTCCGACGCCATCCCCTCCTCAATCAAAAAAGATCGGCACAGTCCTCGGCCGGCCCATGGAGGACGTGAAGGCTACGTACAGCATAGGAAAGGAGGTAGGACGAGGACAATTCGGTGTCACACATTTATGTACACATAAACAAACTGGTGAACAATTTGCATGCAAGACCATAGCCAAGAGGAAGCTTGTGAACCAAGAAGATATAGAAGATGTACGTAGGGAGGTTCAAATCATGCACCATTTGGCGGGTCAACCTAATATTGTGGAGCTCAAAGGTGCTTATGAGGACAAGCAATCGATCCATCTCGTCATGGAGCTCTGCGCCGGTGGCGAGCTCTTCGACCGGATCATCGCCAGAGGTCATTACACAGAGAGAGCTGCCGCGTCGTTGATGAGGACCATAGTTGAGATTGTACATACTTGTCATTCCATGGGGGTCATACATAGAGATCTTAAGCCTGAGAATTTCCTCCTGCTTAATAAGGAGGGGAATTCTCCTCTCAAAGCCACCGATTTTGGTCTCTCCGTTTTTTACAAGCAAGGAGAGATATTTAAAGACATAGTTGGGAGTGCATATTACATAGCACCAGAGGTATTGAGGAGGAAATACGGACCAGAAGCAGATATTTGGAGTGTTGGTGTAATGCTTTACATTCTTCTTTGTGGGGTTCCTCCATTTTGGGCAGAATCAGAAAATGGAATATTCAATGCCATATTAAGAGGGCATGTTGACTTTACAACGGATCCATGGCCAAACATATCTCCTTCAGCAAAAGATCTCATCAGAAAAATGTTAAATATAGATCCCAAGCAAAGGCTCACAGCTTATCAAGTCTTGGATCATCCATGGATAAAGGAGGATGGAGAAGCACCAGATACACCTCTTGATAATGCTGTGCTGAATAGACTCAAGCAATTCAGAGCCATGAACCAATTCAAGAAAGTTGCTCTCAAGGTAATTGCTGGGTGCTTATCAGAGGAAGAAATAATGGGGTTGAAGGAGATGTTCAAGGGTATGGACACTGACAATAGTGGAACCATAACAATTGAAGAGCTCAAGCAAGGCCTTGCAAAGCAGGGCACAAAACTCACTGAGCAAGAAGTCAAGCAATTATTAGATGCTGCAGATGCTGATGGGAATGGAACCATAGATTATGACGAGTTCATCACTGCAACATTGCATTTGAACCGAATCAACAAAGAAGAACATCTTTATACTGCTTTCCAATACTTTGATAAAGACAATAGCGGGTTCATCACGATGGAAGAATTAGAGCAGGCACTCCGGGAATATAACATGCATGATGGTAGGGATATCAACGAAATATTATCAGAAGTCGATTCAGATAATGATGGGAGGATAAACTACGAGGAGTTCTCAGCAATGATGAGGAAAGGAGCTCCAGAAGCCCAAACCAGGAAGAGACGTACAGAGTCATTTATTTAA 1596 0.4398 MGNCYSGKGNDAPSTDNDNNNKGGEATTDNQQNNIINNTRQETPTSSKPSPTPSPPQSKKIGTVLGRPMEDVKATYSIGKEVGRGQFGVTHLCTHKQTGEQFACKTIAKRKLVNQEDIEDVRREVQIMHHLAGQPNIVELKGAYEDKQSIHLVMELCAGGELFDRIIARGHYTERAAASLMRTIVEIVHTCHSMGVIHRDLKPENFLLLNKEGNSPLKATDFGLSVFYKQGEIFKDIVGSAYYIAPEVLRRKYGPEADIWSVGVMLYILLCGVPPFWAESENGIFNAILRGHVDFTTDPWPNISPSAKDLIRKMLNIDPKQRLTAYQVLDHPWIKEDGEAPDTPLDNAVLNRLKQFRAMNQFKKVALKVIAGCLSEEEIMGLKEMFKGMDTDNSGTITIEELKQGLAKQGTKLTEQEVKQLLDAADADGNGTIDYDEFITATLHLNRINKEEHLYTAFQYFDKDNSGFITMEELEQALREYNMHDGRDINEILSEVDSDNDGRINYEEFSAMMRKGAPEAQTRKRRTESFI 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0451 531 FunFam calcium-dependent protein kinase 1 162 341 - -
Alju07g0451 531 Pfam Protein kinase domain 76 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g0451 531 Gene3D Transferase(Phosphotransferase) domain 1 162 341 - -
Alju07g0451 531 SUPERFAMILY Protein kinase-like (PK-like) 50 360 IPR011009 -
Alju07g0451 531 ProSiteProfiles EF-hand calcium-binding domain profile. 413 448 IPR002048 GO:0005509
Alju07g0451 531 ProSiteProfiles EF-hand calcium-binding domain profile. 488 519 IPR002048 GO:0005509
Alju07g0451 531 Gene3D - 342 517 - -
Alju07g0451 531 ProSiteProfiles Protein kinase domain profile. 76 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g0451 531 MobiDBLite consensus disorder prediction 8 47 - -
Alju07g0451 531 Pfam EF-hand domain pair 451 514 IPR002048 GO:0005509
Alju07g0451 531 Pfam EF-hand domain pair 382 442 IPR002048 GO:0005509
Alju07g0451 531 ProSitePatterns EF-hand calcium-binding domain. 390 402 IPR018247 -
Alju07g0451 531 ProSitePatterns EF-hand calcium-binding domain. 426 438 IPR018247 -
Alju07g0451 531 FunFam Calcium-dependent protein kinase 1 342 517 - -
Alju07g0451 531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Alju07g0451 531 Gene3D Phosphorylase Kinase; domain 1 78 161 - -
Alju07g0451 531 CDD STKc_CAMK 76 333 - -
Alju07g0451 531 PANTHER SERINE/THREONINE-PROTEIN KINASE 70 509 - -
Alju07g0451 531 SMART efh_1 381 409 IPR002048 GO:0005509
Alju07g0451 531 SMART efh_1 417 445 IPR002048 GO:0005509
Alju07g0451 531 SMART efh_1 488 516 IPR002048 GO:0005509
Alju07g0451 531 SMART efh_1 453 481 IPR002048 GO:0005509
Alju07g0451 531 ProSitePatterns Protein kinases ATP-binding region signature. 82 109 IPR017441 GO:0005524
Alju07g0451 531 ProSiteProfiles EF-hand calcium-binding domain profile. 449 484 IPR002048 GO:0005509
Alju07g0451 531 ProSitePatterns EF-hand calcium-binding domain. 462 474 IPR018247 -
Alju07g0451 531 MobiDBLite consensus disorder prediction 1 67 - -
Alju07g0451 531 SUPERFAMILY EF-hand 374 514 IPR011992 -
Alju07g0451 531 ProSiteProfiles EF-hand calcium-binding domain profile. 377 412 IPR002048 GO:0005509
Alju07g0451 531 SMART serkin_6 76 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g0451 531 ProSitePatterns EF-hand calcium-binding domain. 497 509 IPR018247 -
Alju07g0451 531 FunFam Calcium-dependent protein kinase 1 78 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0451 Alju-ChrAlju07 5546856 5552012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0451 1 530 EF-hand Containing Proteins AT5G12180 78.947 0.0 883
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Alju07g0451 Pkinase 3.3e-76 CL0016