Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0432 ATGGTGCCTCTTTGTTGGCGAACTGGTGTGTCGTGCGAACAGACATACCAGAACGGAGCGAACAGAAGCGAATGATCTTGGTTGATTTTGTCTGATTGCTTGAATTGTCATGCACTGAATGGCTTGATTGGATTCGCTATTATGAATTGTTTGCATTCTCATAGAAGATGTTTTGAAGAGCACAAATATCCCACAGAAGAAATGAAATCAGAACTTGCTGAGGAGTTAGGCTTGACTGAAAAGCAAGTATCTGGATGGTTTTGCCACAGAAGGTTAAAAGATAAAAGATTGCTGAAAGATGAAACTTGTGCTAATGGACGACAAGATCGCTCAAGTGGCGTTGTCCAGGACCATGTAAGTGGACTAAGGCAAGATTCATGTGGAAGCACTAAACATGGTGATTATAAGCATCTTGATCTGAAAGAGGTTGAGAGTCATGGCTTCTATGGCAATGGCTTTTCCGTTGCAGATGTGACATATGAACATAATAGAGACTATAATGAAGATGTTGATGGAATGGATAACACATCTTCTGAGAGTAGCTCATCTTTACAAGATCAGTTGTTCTCTCAAGGTCAGGATCCATATAATATGGAGCCTTCTAGATATCTGACACCTAACAGAGCTCTGCCACCTTTGGTTCCCAAAGCTGCAATTAACATTGGATATAAGCCATCGGGATATTTGAAAGTGAAGGGTGAGATAGAAAATGCTGCTATAACTGCTGTCAAGAAGCAATTAGGAAGGAAGTATCGGGAAGATGGTCCCCTGCTTGGAGTGGAATTTGATCCAGTTCCTCCAGGGGCATTTGAGTGCCAAATTGCAGCAGATCCAGTTGATGGTAGGGATGATATCATGATAGCACAAGGCATTTCTATAATTGTATGCTTATCTACTTATGCTTAATCATTGCAATTCCATACTGTGAATCCTTCTCTTCCCAGTCCTCCAGAATCTGCCGTGAAAGGGCAACCCGCCCTTAACCCTAGGTATGATTCCAAATATGGTTCCCATGATTTAGATATGGAAGTGGGAGATCTCGGCTCCTTGCATGACACTGACTTGCTGGATAGAAAACCTCACCGGCACAAGCAAGGGCGGACGTTTCAGAGTTATACTAATCGTTTACCTCATAGGAGCTCGCCCCTGGAGTTGTATGAAGATCCCACTGGAGCAGTGCCTGCCTATAATACAATGGGCTCTAAGCACGGTGAAGGGATGAGATCTGATTCTGCTTCTTACCATAGTGATCACTTTGAAGAGGACCTTGTTGTTAAGCAGACAGATTCACTTCTGCATTGCTATGATAATGTCAATCCAAAGAAAACTCAGAGGAGTGAGCATATAAAATCTAAGCCTTCAAAGTCATTAAAAAATTCTCGCATTTTTATTGATACTGAAGAAAGAGGACTATCTTCAAGGATAGCAAAGGAAGAGAAGTTTGGTGGGGACAAGAAGGCAAGAAAACAATACCGTGATTCAGAGAGAACAAGGATTCGTCCAAATGAAACCACGATTGCAAAAAGAGTTAAAGATGATCTTCCTCAACAACAAAATCTGAAACATGCACTAGTAGCTGAGATGCAACCTCAGAAAAATCGGAGGTCTGCAACAGAGATGCTTTCTAGCTTTAGTGAGGATGAAACCGCTGAAGCCAGTTATTCGCTGGACTAA 1674 0.42 MVPLCWRTGVSCEQTYQNGANRSEXSWLILSDCLNCHALNGLIGFAIMNCLHSHRRCFEEHKYPTEEMKSELAEELGLTEKQVSGWFCHRRLKDKRLLKDETCANGRQDRSSGVVQDHVSGLRQDSCGSTKHGDYKHLDLKEVESHGFYGNGFSVADVTYEHNRDYNEDVDGMDNTSSESSSSLQDQLFSQGQDPYNMEPSRYLTPNRALPPLVPKAAINIGYKPSGYLKVKGEIENAAITAVKKQLGRKYREDGPLLGVEFDPVPPGAFECQIAADPVDGRDDIMIAQGISIIVCLSTYAXSLQFHTVNPSLPSPPESAVKGQPALNPRYDSKYGSHDLDMEVGDLGSLHDTDLLDRKPHRHKQGRTFQSYTNRLPHRSSPLELYEDPTGAVPAYNTMGSKHGEGMRSDSASYHSDHFEEDLVVKQTDSLLHCYDNVNPKKTQRSEHIKSKPSKSLKNSRIFIDTEERGLSSRIAKEEKFGGDKKARKQYRDSERTRIRPNETTIAKRVKDDLPQQQNLKHALVAEMQPQKNRRSATEMLSSFSEDETAEASYSLD 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0432 557 SMART HOX_1 52 101 IPR001356 GO:0003677
Alju07g0432 557 MobiDBLite consensus disorder prediction 475 516 - -
Alju07g0432 557 SUPERFAMILY Homeodomain-like 56 105 IPR009057 -
Alju07g0432 557 CDD homeodomain 55 96 IPR001356 GO:0003677
Alju07g0432 557 MobiDBLite consensus disorder prediction 475 557 - -
Alju07g0432 557 MobiDBLite consensus disorder prediction 315 338 - -
Alju07g0432 557 MobiDBLite consensus disorder prediction 164 204 - -
Alju07g0432 557 MobiDBLite consensus disorder prediction 531 557 - -
Alju07g0432 557 MobiDBLite consensus disorder prediction 173 200 - -
Alju07g0432 557 ProSiteProfiles 'Homeobox' domain profile. 58 97 IPR001356 GO:0003677
Alju07g0432 557 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 58 276 - -
Alju07g0432 557 Pfam Homeodomain 56 96 IPR001356 GO:0003677
Alju07g0432 557 Gene3D - 51 104 - -
Alju07g0432 557 MobiDBLite consensus disorder prediction 373 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0432 Alju-ChrAlju07 5264340 5275892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0432 58 279 Homeobox Transcription Factor Family AT4G03250 56.637 7.00e-63 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Alju07g0432 Homeodomain 8.1e-13 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g0432 07 5264340 5275892 Alju07g0432 07 5264340 5275892 ECH