Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0407 ATGTCTTCCATTGCTGGCTCTTATGGTTACATTGCTCCAGAGTATGCGTACACGTTAAAGGTTGATGAGAAGAGTGATGTTTATAGCTTCGGGGTGGTACTGCTGGAACTCTTGACTGGTAGACGGCCGGTGGGAGATTTCGGAGAAGAAGGAATAGACATTGTTCAGTGGACAAAGATGCAAACAAACTGGAGCAAAGACAAGGTGGTGAGGGTCCTTGATGAGAGGCTGCACAATAGTAGTATTCCTATAGATGAAGCAAAACAAGTGTTCTTTGTGGCCATGCTTTGTGTTCAAGAACACAGTGTGGAGAGACCCACCATGAGAGAAGTGGTTGAAATGCTGGTACAAGCAAAGCAGCCCAATACATTTTAA 375 0.448 MSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELLTGRRPVGDFGEEGIDIVQWTKMQTNWSKDKVVRVLDERLHNSSIPIDEAKQVFFVAMLCVQEHSVERPTMREVVEMLVQAKQPNTF 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0407 124 Gene3D Transferase(Phosphotransferase) domain 1 1 123 - -
Alju07g0407 124 Pfam Protein tyrosine and serine/threonine kinase 9 115 IPR001245 GO:0004672|GO:0006468
Alju07g0407 124 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 119 - -
Alju07g0407 124 ProSiteProfiles Protein kinase domain profile. 1 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g0407 124 SUPERFAMILY Protein kinase-like (PK-like) 2 116 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0407 Alju-ChrAlju07 4939004 4940473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0407 1 117 Receptor kinase-like Gene Family AT5G65700 72.650 4.32e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju07g0407 PK_Tyr_Ser-Thr 4.8e-12 CL0016