Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0406 ATGGCTTCTTCTTCTTCTTCCATGGCTTCTCTGTTATTTCACTCCCTTTTTCTTCTTCTCTGTCTCACTGCCTCTTGTTCTTCTTCTTCTTCTACTTCTGTTTCATCACTTCCTCTCTTGTCTCTCAAAAGGCAAGCTTCAATCTTGGTTTCTCTCAGACAAGGTTTTCAACGTCAAAATTATTCTCTTGAATCCTGGGACGTGTCTAATTATCTGTCCCTCTGTTCTTGGGATGGCATCCAATGTGACCATAGCAACAGGTCTGTGGTTTCCCTTGACATATCCAATTACAACATTTCTGGGTTTCTTTCCCCTGTCATCGCCGAGCTCCGGGGACTTGTGTCTATCTCTGTCGCCGATAACAGCTTTTCCGGCGATCTTCCTCCGGAGATTCTCCGGCTTCCCGACCTGCGGTTCTTCAACATATCCAACAACATGTTCACTGGGAATCTTAGTTGGGATTTCTCCGACATGAGTGAGCTTGAGGTTCTTGATGCTTATGACAACGAATTTAACGGCGAACTACCTCTCGGAGTCACCAACCTTACCAAGCTCAGGCACTTGAATTTTGGCGGGAATTACTTCTCCGGGAGAATCCCAGAAGACTATGGGAAAATGGTGGGCTTGAATTTTCTCTCTCTTGCTGGGAATGATCTAAGTGGGATTATACCCAGTGAGCTTGGGAATCTTACAAATTTGACCTATTTATATTTGGGGTATTTCAACAAGCTTGATGGTGGAATCCCAAGTGAGTTTGGGAATCTAATCAATTTGGTTCATCTAGACCTTGCAAATTGTAGCTTGAATGGTACAATTCCTTCAGAATTAGGCAAGCTCTCAAAATTAGACACTCTTTTCTTGCAAACCAATCAGCTTGCTGGTTCAATCCCACCTCAAATTGGCAATTTGAGCAACTTGAGATCTCTTGATCTGTCCAACAATGAGCTAATTGGAGAAATCCCATTTGAGCTCTCAAACCTCCAAGAGCTCACACTCATAAACTTGTTCATCAACAAATTGCATGGTGAGATTCCTCAGTTCATCTCTGAGCTCCCAAAGCTTGATACTTTACATCTATGGAAGAACAACTTCACTGGTTCAATCCCTTCTGGGCTTGGCCAGAATGGGAAATTAATTGAGCTTGATCTTTCATCAAATAAGCTTACTGGGTTAGTCCCAAAATCTCTCTGCCTGGGAAAGAAGCTCAAGATCTTAATCTTGCTCAACAATTTTCTCTTTGGATCTTTACCTGATGACCTTGGAGAATGCTACACACTTCAAAGAGTTCGCTTGGGTCAGAACTATTTGACAGGAAAAATACCAAATGGGTTTCTTTATCTGCCTGAACTTTTACTTCTTGAGCTGCAGAACAACTATCTCGTTGGTGTTCTTCCTCAAGATTCAGCCAATTCAACATCAAAATTAGAGCAGTTGAATCTATCAAACAATCGTCTGTCCGGGTCACTCCCAGAATCAATTGGGAATTTCCCCAATTTGCAGAATCTTCTCCTCAGTGAAAACAGATTCTCTGGAGGAATCCCACCAGATATAGGGAGGTTGAAGAATCTATTAAAGTTGGATATGAGCAAAAACAACATATCAGGTGGTATTCCTTCAGAGATAGGGAACTGTGCTTTGCTCACATACTTAGACTTGAGCCAGAACCAACTTTCAGGTCCCATACCTGTCCAAATTTCCCAAATTCACATCTTGAACTATCTTAATGTCTCAAGTAACAACCTTAACCAGAGCCTCCCAAAAGAACTAGGGACCATGAAAGGGTTAACCTCAGCAGATTTCTCTCACAACAACTTCTCTGGTTCAATTCCTGATGTTGGGCTGTTCACAGTCTTGAACTCATCCTTCTTTCAGGGAAACCCAAATCTATGTGGGTATGATCTAAACCCATGTGGCACTCATTCATCAAACTCACTTTCAGACTCTCATGAGACTGACAATACAAAATCTGGAGTTCCTGGGAAGTACAAGCTTCTTTTTGCACTTGCACTACTGGGATGTTCTTTAATTTTTGCAGCCTTAGCTATCATCAAAAGCAGAAAGAAGGCAAGGAGGAATTCAAATTCATGGAAGCTCACAGCATTTCAGAAGCTAGAATATGGGAGTCAAGACATATTGGGATGCATAAAGGAGAGCAATGTGATAGGAAGAGGAGGAGCTGGGATTGTGTACAGAGGCACCATGCCAAATGGTGAGGAGCTAGCAGTGAAAAAACTGTTAGGATTCAACAAAGGCTCTTCTCATCATGACAATGGCTTATCTGCAGAAATAAGAACATTGGGCAGGATAAGGCATAGGTACATTGTGAGATTATTAGCTTTGGTCACAAATAGAGAGACAAATTTGCTTGTATATGAGTACATGCCAAATGGGAGCTTGGGCGAAGTACTTCACGGTAAGAGAGGCGAGTTCTTGAAGTGGGAAACAAGGCTTAAGATTGCCATTGAAGCAGCAAAAGGGCTTTGTTATCTGCACCATGATTGTTCACCATTGATAATACATAGAGATGTGAAGTCTAATAACATTGTTAAATTCTGA 2556 0.4182 MASSSSSMASLLFHSLFLLLCLTASCSSSSSTSVSSLPLLSLKRQASILVSLRQGFQRQNYSLESWDVSNYLSLCSWDGIQCDHSNRSVVSLDISNYNISGFLSPVIAELRGLVSISVADNSFSGDLPPEILRLPDLRFFNISNNMFTGNLSWDFSDMSELEVLDAYDNEFNGELPLGVTNLTKLRHLNFGGNYFSGRIPEDYGKMVGLNFLSLAGNDLSGIIPSELGNLTNLTYLYLGYFNKLDGGIPSEFGNLINLVHLDLANCSLNGTIPSELGKLSKLDTLFLQTNQLAGSIPPQIGNLSNLRSLDLSNNELIGEIPFELSNLQELTLINLFINKLHGEIPQFISELPKLDTLHLWKNNFTGSIPSGLGQNGKLIELDLSSNKLTGLVPKSLCLGKKLKILILLNNFLFGSLPDDLGECYTLQRVRLGQNYLTGKIPNGFLYLPELLLLELQNNYLVGVLPQDSANSTSKLEQLNLSNNRLSGSLPESIGNFPNLQNLLLSENRFSGGIPPDIGRLKNLLKLDMSKNNISGGIPSEIGNCALLTYLDLSQNQLSGPIPVQISQIHILNYLNVSSNNLNQSLPKELGTMKGLTSADFSHNNFSGSIPDVGLFTVLNSSFFQGNPNLCGYDLNPCGTHSSNSLSDSHETDNTKSGVPGKYKLLFALALLGCSLIFAALAIIKSRKKARRNSNSWKLTAFQKLEYGSQDILGCIKESNVIGRGGAGIVYRGTMPNGEELAVKKLLGFNKGSSHHDNGLSAEIRTLGRIRHRYIVRLLALVTNRETNLLVYEYMPNGSLGEVLHGKRGEFLKWETRLKIAIEAAKGLCYLHHDCSPLIIHRDVKSNNIVKF 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0406 851 PRINTS Leucine-rich repeat signature 472 485 - -
Alju07g0406 851 PRINTS Leucine-rich repeat signature 378 391 - -
Alju07g0406 851 SUPERFAMILY L domain-like 320 655 - -
Alju07g0406 851 Gene3D Transferase(Phosphotransferase) domain 1 794 850 - -
Alju07g0406 851 Pfam Leucine Rich Repeat 305 327 IPR001611 GO:0005515
Alju07g0406 851 Pfam Leucine Rich Repeat 377 397 IPR001611 GO:0005515
Alju07g0406 851 Pfam Leucine Rich Repeat 257 279 IPR001611 GO:0005515
Alju07g0406 851 Gene3D Ribonuclease Inhibitor 245 342 IPR032675 -
Alju07g0406 851 Gene3D Ribonuclease Inhibitor 156 244 IPR032675 -
Alju07g0406 851 SMART LRR_typ_2 351 375 IPR003591 -
Alju07g0406 851 SMART LRR_typ_2 568 592 IPR003591 -
Alju07g0406 851 SMART LRR_typ_2 520 544 IPR003591 -
Alju07g0406 851 SMART LRR_typ_2 303 327 IPR003591 -
Alju07g0406 851 SMART LRR_typ_2 255 279 IPR003591 -
Alju07g0406 851 SMART LRR_typ_2 472 496 IPR003591 -
Alju07g0406 851 SMART LRR_typ_2 447 470 IPR003591 -
Alju07g0406 851 SMART LRR_typ_2 206 229 IPR003591 -
Alju07g0406 851 SMART LRR_typ_2 376 398 IPR003591 -
Alju07g0406 851 ProSiteProfiles Leucine-rich repeat profile. 305 328 IPR001611 GO:0005515
Alju07g0406 851 SUPERFAMILY Protein kinase-like (PK-like) 710 849 IPR011009 -
Alju07g0406 851 ProSiteProfiles Leucine-rich repeat profile. 474 496 IPR001611 GO:0005515
Alju07g0406 851 SMART tyrkin_6 715 851 IPR020635 GO:0004713|GO:0006468
Alju07g0406 851 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 684 793 - -
Alju07g0406 851 ProSiteProfiles Protein kinase domain profile. 715 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g0406 851 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 155 242 - -
Alju07g0406 851 Pfam Leucine rich repeat N-terminal domain 43 83 IPR013210 -
Alju07g0406 851 SUPERFAMILY L domain-like 70 392 - -
Alju07g0406 851 ProSiteProfiles Leucine-rich repeat profile. 377 398 IPR001611 GO:0005515
Alju07g0406 851 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 355 641 - -
Alju07g0406 851 Pfam Leucine rich repeat 453 509 IPR001611 GO:0005515
Alju07g0406 851 Gene3D Ribonuclease Inhibitor 44 155 IPR032675 -
Alju07g0406 851 Pfam Protein kinase domain 717 848 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g0406 851 Gene3D Ribonuclease Inhibitor 343 645 IPR032675 -
Alju07g0406 851 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 243 348 - -
Alju07g0406 851 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 44 154 - -
Alju07g0406 851 Gene3D Phosphorylase Kinase; domain 1 683 793 - -
Alju07g0406 851 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 241 848 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0406 Alju-ChrAlju07 4936381 4938936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0406 30 849 Receptor kinase-like Gene Family AT5G65700 54.380 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju07g0406 Pkinase 2.8e-21 CL0016