Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0404 ATGGTCGGTGGCAACAACATAAACTCAGTATTCTATGCCGACTCATACCATCCCATTCAAGTTGGCAGCATAGACGGCACAGATATTCTTCCTCACGATAATGCTGTTTATCGAGCTCTTCTCTGTTCTTCCGCTGGCCTCTACGACCCATTTGGCGATCCCAAGGCCACAGGAGACCCATATTGTACTGTCTTCGTAGGCCGCCTCTCCCGCGCCACCACAGAAGAAACACTTCACAAGGTAATGGGCAAGTATGGTCGGGTGAAGAACTTGCGCTTGGTCAGGGACATTGTGACTGGGGCCTCCTGTGGTTATGCTTTTGTTGAATATGAAACTGAAAGTGAGATGCGGCGTGCTTATGAGGATGCTCATCATTCTTTTATTGACGATTGTGAAATCCTAGTTGATTTTAACAGACAGCAATTGATGCCTGGGTGGATTCCTAGAAGGTTAGGTGGTGGTCTTGGCGGTAAGAAGGAATCTGGACAACTTCGTTTCGGTGGGAGGGAAAGGCCATTTCGAGCTCCTCTGAGACCAATACCATACAAGGATTTGGAGAAGCTTGGCATTCCACCTCCTCCCGAAGGAAGATACATGTCACGCTTTCAGATCCCATCGCCTCCTAGAAAAGAAAGGAGCAATCGAGAGAGAGAAAGCTCTAGCAGGAGGAGGAGTTTTAATGACAGGATCGAAGGTGCCGAGAGGCGTTATAAGAGTAGTTCAAGTCACCGAGACGACGACCATACTCATCGAAGGAGATCCACGGAGAGAAGAGAGGAGAGAGATGGGGATTACTATAGTAGTAGCAGGAGTTACGCTGAGAAGGAGCGTTATTCGAGGCAGGAACACGCTCGTAAAAGGAAAGATAGAGATGAACACTCTGAGAGGAGGCAGAAACATGACCGTTATTCCCATCGTGATGATTAA 927 0.4811 MVGGNNINSVFYADSYHPIQVGSIDGTDILPHDNAVYRALLCSSAGLYDPFGDPKATGDPYCTVFVGRLSRATTEETLHKVMGKYGRVKNLRLVRDIVTGASCGYAFVEYETESEMRRAYEDAHHSFIDDCEILVDFNRQQLMPGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIPYKDLEKLGIPPPPEGRYMSRFQIPSPPRKERSNRERESSSRRRSFNDRIEGAERRYKSSSSHRDDDHTHRRRSTERREERDGDYYSSSRSYAEKERYSRQEHARKRKDRDEHSERRQKHDRYSHRDD 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0404 308 Gene3D - 49 169 IPR012677 -
Alju07g0404 308 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 11 269 - -
Alju07g0404 308 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 64 133 IPR000504 GO:0003723
Alju07g0404 308 SMART rrm1_1 63 136 IPR000504 GO:0003723
Alju07g0404 308 MobiDBLite consensus disorder prediction 151 308 - -
Alju07g0404 308 MobiDBLite consensus disorder prediction 208 308 - -
Alju07g0404 308 FunFam Small nuclear ribonucleoprotein U11/U12 subunit 35 49 170 - -
Alju07g0404 308 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 62 140 IPR000504 GO:0003723
Alju07g0404 308 SUPERFAMILY RNA-binding domain, RBD 50 168 IPR035979 GO:0003676
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0404 53 135 Eukaryotic Initiation Factors Gene Family AT1G49760 31.325 3.29e-06 46.6