Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0396 ATGAGGCTTTCTTCTTCAGGACTTGGTCAACCGGCTCAAGAAGGGGAGAACAAATGTTTAAATTCTGAACTATGGCATGCATGTGCTGGTCCTCTGGTGTCTCTGCCACCTGTTGGAAGTCGTGTGGTCTACTTTCCCCAAGGTCATAGTGAGCAGGTTGCTGCTTCAACTAACAAGGAAGTAGATGCACATATTCCCAATTACCCGAACTTGCCACCACAGCTTATCTGTCAGCTTCACAATGTGACAATGAATGCAGATGTGGAAACAGATGAAGTATATGCTCAAATGACTCTGCAACCTTTAAGTCCGCAAGAGCAAAAAGATATATATCTACTGCCTGCAGAATTGGGTACTGCCAGCAAACAACCAACCAACTACTTCTGCAAAACATTAACAGCAAGTGATACAAGCACGCATGGAGGATTTTCTGTCCCTCGTAGAGCTGCTGAAAAAGTCTTCCCTCCTCTTGATTACTCGCTGCAGCCTCCTGCACAGGAACTAATTGCAAGGGATCTTCATGATAATGAATGGAAATTCAGACACATTTTTCGAGGTCAGCCAAAGAGGCATCTTCTAACTACAGGGTGGAGTGTTTTTGTTAGTGCTAAGAGGCTTGTTGCTGGTGATGCAGTCCTTTTTATCTGGAATGACAAAAATCAGTTACTCTTGGGAATCCGGCGAGCAAATCGTCCACAGACTATCATGCCGTCTTCAGTTCTGTCAAGTGACAGCATGCATATAGGTCTTCTTGCAGCTGCTGCTCATGCAGCTGCGACAAATAGCCGCTTTACTATATTTTATAACCCAAGGGCAAGCCCATCAGAATTTGTCATTCCCTTAGCTAAGTATGTCAAAGCTGTATATCATACCCGAGTTTCTGTTGGCATGCGATTTAGGATGTTATTTGAGACAGAAGAATCAAGCGTCCGTAGGTATATGGGCACTATAACAGCCATTAGTGATTTAGATCCTGTTCGTTGGCCAAATTCACACTGGCGTTCAGTGAAGGTTGGCTGGGATGAGTCCACTACAGGGGACAGGCAGCCTAGAGTTTCCTTGTGGGAGATTGAACCGTTGACAACATTCCCTATGTATCCATCCCCATTCCCATTGAGGCTGAAACGCCCTTGGCCATCAGGACTACCTTCTTTTGGTCTAAAGGATGGTGACGTGAGCATTGGTTCTCCATTAACGTGGCTCCAAGGTGGGCTTGGGGATCCAGGAATGCAATCTTTGAACTTCCAGGGACTGGGGGTTGCACCATGGATGCAGCCAAGACTTGATGCTTCTATGTCAGGACTTCAGCCAGAAATATACCAAGCAATGGCTGCTGCTGCACTTCAGGAAATGAGGGCAATGGGTCCGTCCAAGCCTTCTTCTGAATCTTTGCTGCAGTTTCAACAGTCTTCAAATATTCCTGGTGCTCCTTCTTCTGGTATCCAGAGGCAAGTGTTACAGCAGTCTCAGTCCCAAAATGTCCTACAAAACTTTCAAGAAAGCCAGATTCCTTCTCAGTCCTTGCTTCTGCAACGACAGTTGCAGCGTTACCATCCTTATAATGATCAGAGGCAGCAGCAGCAATCTAACAGTTTACCTGTTCAGCAGCAGATCTCAAACGTTGTCTCTCCTTTGTCTAATTTCGCATCATCTACCCAGTTTCTCTCTCCATCCATGCCAGCCATTGCTTCAAATTGCCAGCAGCAGAGTTTTCAGGAACCTTCCAGGAACCAAATTCCCAGCTCTGATGTTTCTGCTATCCAGAGTCTACTAGGATCATTTCCCCAGGATGGAGTATCCCAGTTACTTAGCATGAATGGATCCAACTCTCTGGTTTCTCCTACTTCTTTACTACCCAAGCAAATAACTGCTGAACTTCAGCTTCAAACTGCTGCTGCTCAGTGTGCATTACCCCAGGTGGAAAACTTGGGAACGTCACACTCAAACGTATCTGAACTTCCTATTTTGCCTCCATTTCCTGGAAGAGAATATTCTGCATACCAAGGTGCTGCTGGTCCTCAGACCAATCTTTTGTTTGGGGTTAATATTGATCCTACTCTTATGTTACAAAATAGCACGTCAAACATGAGAAATGATGGCAATGAGAATGATACATTATTGATGCCCTTTTCAGCTTCAAACTTTGCTGGTGCTACAGGGACTGATTATCCTCCAAGTTCAGACATGACAACATCAAGTTGTGTAGATGAATCTGGCTTTTTGCAGTCTTCTGAAAATGTGGAGCAAGCAAATACATCAACTGGAACCTTTGTCAAGGTTCAAAAGTCAGGGTGCTTTGGGAGGTCACTGGACATCTCTAAGTTTAGCAGCTATGATGAACTACGTAGTGAGCTTGCTCGCATGTTTGGGCTTGAAGGCCAACTAGAGAACCCTCGGAGATCAGGCTGGCAGCTTGTATTCGTTGACCGGGAGAATGATGTTCTTCTCCTTGGTGATGACCCTTGGCAGGAGTTTGTGAACAATGTGTGGTACATCAAGATTCTGTCTCCACTTGAAGTACAACAAATGGGCAGAGAAAGTCTTGGTCCCACAGCTTCTGCATTGGGCCACAAGCTTTCTACCACTAGCAATGCTTGCGATAACTACATGAGTCGACAAGAGATGAGAAATCCTAGTAATGGCATTGCGTCGATGGGGTCTCTAGACTACTAG 2673 0.4534 MRLSSSGLGQPAQEGENKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQLHNVTMNADVETDEVYAQMTLQPLSPQEQKDIYLLPAELGTASKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSLQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVLFIWNDKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITAISDLDPVRWPNSHWRSVKVGWDESTTGDRQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPSGLPSFGLKDGDVSIGSPLTWLQGGLGDPGMQSLNFQGLGVAPWMQPRLDASMSGLQPEIYQAMAAAALQEMRAMGPSKPSSESLLQFQQSSNIPGAPSSGIQRQVLQQSQSQNVLQNFQESQIPSQSLLLQRQLQRYHPYNDQRQQQQSNSLPVQQQISNVVSPLSNFASSTQFLSPSMPAIASNCQQQSFQEPSRNQIPSSDVSAIQSLLGSFPQDGVSQLLSMNGSNSLVSPTSLLPKQITAELQLQTAAAQCALPQVENLGTSHSNVSELPILPPFPGREYSAYQGAAGPQTNLLFGVNIDPTLMLQNSTSNMRNDGNENDTLLMPFSASNFAGATGTDYPPSSDMTTSSCVDESGFLQSSENVEQANTSTGTFVKVQKSGCFGRSLDISKFSSYDELRSELARMFGLEGQLENPRRSGWQLVFVDRENDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMGRESLGPTASALGHKLSTTSNACDNYMSRQEMRNPSNGIASMGSLDY 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0396 890 Gene3D - 751 844 - -
Alju07g0396 890 MobiDBLite consensus disorder prediction 459 485 - -
Alju07g0396 890 Pfam Auxin response factor 254 337 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Alju07g0396 890 ProSiteProfiles B3 DNA-binding domain profile. 128 230 IPR003340 GO:0003677
Alju07g0396 890 SUPERFAMILY CAD & PB1 domains 746 829 - -
Alju07g0396 890 FunFam Auxin response factor 292 364 - -
Alju07g0396 890 SUPERFAMILY DNA-binding pseudobarrel domain 113 257 IPR015300 -
Alju07g0396 890 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 844 IPR044835 GO:0003677|GO:0006355|GO:0009725
Alju07g0396 890 Gene3D - 292 364 - -
Alju07g0396 890 ProSiteProfiles PB1 domain profile. 755 839 IPR000270 GO:0005515
Alju07g0396 890 MobiDBLite consensus disorder prediction 452 485 - -
Alju07g0396 890 CDD B3_DNA 127 228 IPR003340 GO:0003677
Alju07g0396 890 FunFam Auxin response factor 126 230 - -
Alju07g0396 890 Pfam AUX/IAA family 744 837 IPR033389 -
Alju07g0396 890 SMART B3_2 128 230 IPR003340 GO:0003677
Alju07g0396 890 FunFam Auxin response factor 750 844 - -
Alju07g0396 890 Pfam B3 DNA binding domain 128 229 IPR003340 GO:0003677
Alju07g0396 890 Gene3D - 126 229 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0396 Alju-ChrAlju07 4823392 4831473 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0396 97 849 B3 DNA Binding Superfamily AT5G37020 54.248 0.0 690
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Alju07g0396 AUX_IAA 5.6e-08 CL0072