Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0384 ATGGGACCAGATCAAGAACTTGTAGAGCTCCTTTGGGAAAATGGACAGGTAGTTTTGAACAGCCAAACACACAGGAAACCATTTTTGAATTCAGTACACTCAAGGCAAGTTCAGAATAATGATCAAACAACATTGAGGACTAGTGGATTATATGGGAACTCGAGTCATAATTTGTTTCAAGAAGATGAGACAGCCTCATGGATCCAATACCCACTAGAAGATCCATTTGAACAAGAATTATGTTCAGACTTTTTACCTGAACTTCCATCTTGTGAGATTGAACCTGATAAGCCAAATAAGCAGTTTGAAGATAAGTTCGCCAAATTCACTACCGATAGCGCCTCCCATCTGACTGCAACATCACAACCACCTAATATGAAAGTGTCCTCTGTTGAGAAATTCTCAGGAAATCCCATCATATCTCCTAGATTTTTTCCTGATTCATCTCAGAAAAATGTTGACTTTAACAGGTCGCCAAAAGTCCTCAATTTCTCTCATTTCTCGGCAGTTCCTAAGGTTGTTTCAGCATCTTCTAATGCACAACATGGAGAAAAAGGTACAGGTAATATGTTGCAAAATGAAGCTGGAGAGGGCTCAGTGATGACATTTGGTTCAAGTCATTGTGGCAGCAATCAAATTCCTCGAGACCGAGACGTGAGCAGGATTTCAAGCAATGGTGTTTGGACTACTGCTAGTTTGTCAGCAGAGCCTTCTTCCTTAAGGGATAATAATGTTCAGAAAAAACTTCCAACGGGTGAAAATGGGAAACCAGAAACACATGAACCAACTCTCACTTCATCTTCCGGGGACTCAGGAAGTAGTCTTGAAAAAACTTGTTCTCGCTCTACTAGTATCTGTAGCCAGAAAAGAAAAGGGACAGATTCAGAAGAGTTAGAGAAACAAAGTGCGACCACAGAACTCAAATCAGTAGCTAGAAACAAGGCTCAGAGGACAGGGTCTTCCCGAAGGAACCGCGTTTCTGAAGTTCATAATCTCTCAGAAAGGAGACGAAGAGACAGGATCAATGAGAAGATGAAGGCGTTGCAACAACTCATACCTCATAGTAACAAGACAGACAAAGCATCAATGCTAGATGAGGCAATAGAATATTTGAAATCACTTCAGTTTCAGCTTCAGATGATGTTGATGGGAGCTGGCATGGCGCCAGTGATGATTCCAGGAATTCAGAACTACATGTCTCAAATGGGTGTGGGATTGGCAACACCTTCTTTGTCTAATAATATGAATATACCGAGAGTGCCACTCGACCAATCCATATCTACGTCTCAAGCACCAAATCAGACTGTAACATTCCAAGCTCCTATTCTGGGTCCCTTTAATTACCAAAATCATATGCAAAATCCATGTCTCTCTGAGCAATATGCACGCTGCATGGGCTATCATCTTATGCAAAGTGCTTCTCAGTCAATGAATGCATTCAGTTATGGTTCCCAGGCAGTACAACACAGTCAAAAAATGATTCCACCCAGCAATGGCAATGGACCCCCTAGTGGGGCAGCTAATACCAATGATGATGTCGGTGGAAGGATGGGTAAGCCAAATTAA 1566 0.4183 MGPDQELVELLWENGQVVLNSQTHRKPFLNSVHSRQVQNNDQTTLRTSGLYGNSSHNLFQEDETASWIQYPLEDPFEQELCSDFLPELPSCEIEPDKPNKQFEDKFAKFTTDSASHLTATSQPPNMKVSSVEKFSGNPIISPRFFPDSSQKNVDFNRSPKVLNFSHFSAVPKVVSASSNAQHGEKGTGNMLQNEAGEGSVMTFGSSHCGSNQIPRDRDVSRISSNGVWTTASLSAEPSSLRDNNVQKKLPTGENGKPETHEPTLTSSSGDSGSSLEKTCSRSTSICSQKRKGTDSEELEKQSATTELKSVARNKAQRTGSSRRNRVSEVHNLSERRRRDRINEKMKALQQLIPHSNKTDKASMLDEAIEYLKSLQFQLQMMLMGAGMAPVMIPGIQNYMSQMGVGLATPSLSNNMNIPRVPLDQSISTSQAPNQTVTFQAPILGPFNYQNHMQNPCLSEQYARCMGYHLMQSASQSMNAFSYGSQAVQHSQKMIPPSNGNGPPSGAANTNDDVGGRMGKPN 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0384 521 MobiDBLite consensus disorder prediction 233 337 - -
Alju07g0384 521 MobiDBLite consensus disorder prediction 258 289 - -
Alju07g0384 521 CDD bHLH_AtPIF_like 325 388 IPR047265 -
Alju07g0384 521 Coils Coil 331 351 - -
Alju07g0384 521 Gene3D - 320 382 IPR036638 GO:0046983
Alju07g0384 521 MobiDBLite consensus disorder prediction 304 320 - -
Alju07g0384 521 SMART finulus 331 380 IPR011598 GO:0046983
Alju07g0384 521 MobiDBLite consensus disorder prediction 487 521 - -
Alju07g0384 521 MobiDBLite consensus disorder prediction 321 337 - -
Alju07g0384 521 MobiDBLite consensus disorder prediction 233 250 - -
Alju07g0384 521 PANTHER TRANSCRIPTION FACTOR PIF3 2 488 IPR044273 GO:0003700|GO:0006355
Alju07g0384 521 FunFam Basic helix-loop-helix transcription factor 320 383 - -
Alju07g0384 521 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 325 374 IPR011598 GO:0046983
Alju07g0384 521 MobiDBLite consensus disorder prediction 487 507 - -
Alju07g0384 521 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 322 388 IPR036638 GO:0046983
Alju07g0384 521 Pfam Helix-loop-helix DNA-binding domain 329 375 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0384 Alju-ChrAlju07 4670701 4673408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0384 1 492 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43010 33.598 3.82e-45 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju07g0384 HLH 6.4e-15 No_clan