Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0369 ATGCAAGAATCAACAATGGCGAGACGACCAAAACAGAAGAACAAGACACTGATCACAGACGCCAGAACCAAGCATGTCGCTTTCTCCAAGCGTCGTCATTCTATGTTCAAGAAAGCCTTCGAGCTCTGTACCTTTTGCGCCGTGGAAATGGCGATCATCATCTTCTCGCCCGGCGGAAAACCCTACTCCTTCGTCCATCCTTCGACCGAAGCAGTTCTCAACAGACTCATCACTGCTGGTTTTTCTGCGAATCTGATGATGATCCGTCGTCGTAATTCTTCTTCTTCTGATGAAGAAGAAAGGGCCCGACAAGTAGCTATAATGGTGGAACTTAACAGACAGTACCGCGATTTGAGTGCTGAGTTGAAAGAAGAGAAGAAAAGAGGGAAGGAGCTGAAGAAGAAGATGAAGAATCTTCCAGATATTGAAAAGATGAACAGAGATGAGCTGATGAAGATGAAGGAGTCGCTTGAAGATCTGAGAGTGAAGGTACAGAATCGTAAAAAGGAGATGTTGGCTGCGAATACGACTATGGATGATGATCTGAGATTAACGTTGGGTGGTGTATATTCTGCAAGAGATCAAGCTTCTTCAAGCTCTGTGAAAACTCATCGTGGTGAAACTGGAGATGAAGATTTTTCTGCAAATATGGATGATGGTGATCTTAGTCTGAGTCGTTCAGCCTTTGTCCCCAAGTGA 699 0.4464 MQESTMARRPKQKNKTLITDARTKHVAFSKRRHSMFKKAFELCTFCAVEMAIIIFSPGGKPYSFVHPSTEAVLNRLITAGFSANLMMIRRRNSSSSDEEERARQVAIMVELNRQYRDLSAELKEEKKRGKELKKKMKNLPDIEKMNRDELMKMKESLEDLRVKVQNRKKEMLAANTTMDDDLRLTLGGVYSARDQASSSSVKTHRGETGDEDFSANMDDGDLSLSRSAFVPK 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0369 232 PRINTS MADS domain signature 10 30 IPR002100 GO:0003677|GO:0046983
Alju07g0369 232 PRINTS MADS domain signature 45 66 IPR002100 GO:0003677|GO:0046983
Alju07g0369 232 PRINTS MADS domain signature 30 45 IPR002100 GO:0003677|GO:0046983
Alju07g0369 232 SUPERFAMILY SRF-like 16 78 IPR036879 GO:0003677|GO:0046983
Alju07g0369 232 SMART madsneu2 7 67 IPR002100 GO:0003677|GO:0046983
Alju07g0369 232 Gene3D - 21 84 IPR036879 GO:0003677|GO:0046983
Alju07g0369 232 PANTHER MADS BOX PROTEIN 12 167 - -
Alju07g0369 232 ProSiteProfiles MADS-box domain profile. 18 68 IPR002100 GO:0003677|GO:0046983
Alju07g0369 232 Coils Coil 108 139 - -
Alju07g0369 232 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 18 64 IPR002100 GO:0003677|GO:0046983
Alju07g0369 232 MobiDBLite consensus disorder prediction 192 232 - -
Alju07g0369 232 Coils Coil 147 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0369 Alju-ChrAlju07 4513048 4513746 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0369 24 164 Type I MADS-box Gene Family AT2G24840 39.073 2.17e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Alju07g0369 SRF-TF 2.3e-18 No_clan