Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0358 ATGGAAGTGATGCACAAGCTTAAAGTAATTAAGTCATCATCATCGGAAGAAGAAGAAGAAGAAGTGATGGCTCCTGGGTTTAGATTCCATCCCACAGATGAAGAACTTGTAGGGTTTTATTTGCAGAGAAAAGTGAAGAAGAAGCCTCTTCGAATCGAACTCATCAAACAGATTGATATCTACAGATACCATCCTTGGGATCTTCCAAAGAGTAATGGTGGGGTGGAGCGGGAGAGAGAAGGGTATTTTTTTTGCAGAAGAGGGAGAAAGTACAGGAACAGCAAGAGGCCTAACAGGGTGACAGTGAGTGGGTCTGGTTTCTGGAAAGCTACAGGCATTGATAAACCTATATATGGAGAAGGAGATCAAAACGGCGTCGTAATAGGCCTGAAGAAGTCATTAGTGTATTATCAAGGAAGTGCTGGTAAAGCCTCCAAAACTGATTGGATGATGCATGAGTTTCGTCTTCCACCTCTTCCTCCCAACAACAACAACACTTCTACTGATCCTCTTCTTCTTCATGATGCTGAAGTTTGGACACTGTGCAAAATATTCAAACGAACCCTATCTCAGAAAAAGTACACACAAGCAGCAGCAATAAAACCCAGCATAGCTCATTCAAGTACTGAACCAGGAAACTTAAGATCTGACATCTATGGCAACTCATGCTTCACTTTCAAAAACCCAATGATCATTCAGCAAAATGATGAAATGAAGCAGATTAGGAAGAACAATGAAGAGGTTGAACATGAAAGGAATCACTTATTTCTGGATCAGTTAGCTCAAGCTTCACCATCAATAGTATCTTACCCTAGCTTTTGGGACGCTGGTGTGATGATGGAAGAGAATATATTTGCTAATGGAAACTGGGATGAGCTTCAACCAATGGTTCAATTAGCTATGGATGATCAATCCAAAGTTTATTATGACTGTATATAG 939 0.4058 MEVMHKLKVIKSSSSEEEEEEVMAPGFRFHPTDEELVGFYLQRKVKKKPLRIELIKQIDIYRYHPWDLPKSNGGVEREREGYFFCRRGRKYRNSKRPNRVTVSGSGFWKATGIDKPIYGEGDQNGVVIGLKKSLVYYQGSAGKASKTDWMMHEFRLPPLPPNNNNTSTDPLLLHDAEVWTLCKIFKRTLSQKKYTQAAAIKPSIAHSSTEPGNLRSDIYGNSCFTFKNPMIIQQNDEMKQIRKNNEEVEHERNHLFLDQLAQASPSIVSYPSFWDAGVMMEENIFANGNWDELQPMVQLAMDDQSKVYYDCI 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0358 312 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 20 240 - -
Alju07g0358 312 Gene3D NAC domain 32 192 IPR036093 GO:0003677|GO:0006355
Alju07g0358 312 ProSiteProfiles NAC domain profile. 23 187 IPR003441 GO:0003677|GO:0006355
Alju07g0358 312 Pfam No apical meristem (NAM) protein 25 156 IPR003441 GO:0003677|GO:0006355
Alju07g0358 312 Coils Coil 231 251 - -
Alju07g0358 312 SUPERFAMILY NAC domain 20 186 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0358 Alju-ChrAlju07 4364358 4367993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0358 13 222 NAC Transcription Factor Family AT5G39820 48.899 2.43e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju07g0358 NAM 1.3e-33 No_clan