Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju07g0351 | ATGAAGGAGAGACAACGTTGGACAACTGAAGAGGATGGTTTATTACGTGCTTATGTTAAACAGTATGGTCCTAGGGAATGGAATCTTGTGTCCCAACGCATGAACAAACCTCTTAACAGGGATGCCAAATCCTGCTTAGAAAGGTGGAAGAACTACCTCAAGCCCGGCATCAAGAAGGGGTCTCTTACTGAAGAAGAGAAATCTCTTGTCATCCATCTTCAACAGATTTACGGCAACAAATGGAAGAAAATTGCTGCAGAAGTCCCAGGTCGTACTGCTAAGAGATTAGGTAAGTGGTGGGAAGTATTTAAAGAGAAGCAGCAGAGAGAGAAAAAGGATATCAACAAAACAGTTGACCCAATTGATGACACCAAATATGATCACATACTTGAGACTTTTGCGGAAAAGCTTGTGAAAGAACGACCTTCCCCATCCTACCTCATGGCTGCCTCCAGTGGGGCCTTTATTCTCACTGATGCACCGGCTCCTCCATCAGCTATGCTTCCTTCTTTACTTTCAAATTCTAACAGCACTTTAGCCATTATGCCGCCTTCGCCTTCTGTGATGCTTAGTCTCTCTCCCTCAACTGTTGCTTCTTCACCTCCATTTCGATGGTTACAACCTGAGAAAATGACAGAGAATGCTTCTCCTGTTATTGGGAATGTAAAACCCCATGGAACTATTCCGGGTTTTGGTGATAACATGCTTGTATCTGAATTGGTTGAATGCTGTAAAGAATTGGAAGAAGGGCATCGGGTGTGGTCATTGCATAGGAAGGAAGCAGCATGGAGGTTAAGGCGGGTGGAGTTGCAGTTGGAGTCAGAGAAGGCATGTCGTATCCGGGAGAAGATGGAAGAGTTTGAAGCTAAGATTAAAGCTCTTTGGGAAGAACAGATGGCTACTTTGGATAGAATGGAAGCTGAATACCGGGAGCGGCTAGCTGAACTGAGAAGAGATGCGGAAACCAAGGAGCAGAAATTGGCTGCAAAGCACTCAAGGCTAAGTAAGTTTCTGGAACAAATAGGTTACAGGCCCAAGCTTACTGGGTCAAATGTAAGATGA | 1062 | 0.4463 | MKERQRWTTEEDGLLRAYVKQYGPREWNLVSQRMNKPLNRDAKSCLERWKNYLKPGIKKGSLTEEEKSLVIHLQQIYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREKKDINKTVDPIDDTKYDHILETFAEKLVKERPSPSYLMAASSGAFILTDAPAPPSAMLPSLLSNSNSTLAIMPPSPSVMLSLSPSTVASSPPFRWLQPEKMTENASPVIGNVKPHGTIPGFGDNMLVSELVECCKELEEGHRVWSLHRKEAAWRLRRVELQLESEKACRIREKMEEFEAKIKALWEEQMATLDRMEAEYRERLAELRRDAETKEQKLAAKHSRLSKFLEQIGYRPKLTGSNVR | 353 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju07g0351 | 353 | ProSiteProfiles | Myb-like domain profile. | 54 | 104 | IPR001005 | - | |
| Alju07g0351 | 353 | SUPERFAMILY | Homeodomain-like | 4 | 98 | IPR009057 | - | |
| Alju07g0351 | 353 | Gene3D | - | 62 | 120 | - | - | |
| Alju07g0351 | 353 | CDD | SANT | 6 | 53 | IPR001005 | - | |
| Alju07g0351 | 353 | FunFam | MYB-related transcription factor | 4 | 58 | - | - | |
| Alju07g0351 | 353 | Coils | Coil | 299 | 333 | - | - | |
| Alju07g0351 | 353 | PANTHER | PROTEIN ROUGH SHEATH 2 HOMOLOG | 1 | 347 | - | - | |
| Alju07g0351 | 353 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 58 | 108 | IPR017930 | - | |
| Alju07g0351 | 353 | Gene3D | - | 4 | 58 | - | - | |
| Alju07g0351 | 353 | SMART | sant | 3 | 55 | IPR001005 | - | |
| Alju07g0351 | 353 | SMART | sant | 58 | 106 | IPR001005 | - | |
| Alju07g0351 | 353 | Pfam | Myb-like DNA-binding domain | 7 | 69 | - | - | |
| Alju07g0351 | 353 | CDD | SANT | 63 | 104 | IPR001005 | - | |
| Alju07g0351 | 353 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 1 | 57 | IPR017930 | - | |
| Alju07g0351 | 353 | ProSiteProfiles | Myb-like domain profile. | 1 | 53 | IPR001005 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju07g0351 | Alju-ChrAlju07 | 4300040 | 4301101 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju07g0351 | 1 | 344 | MYB Transcription Factor Family | AT2G37630 | 62.740 | 1.19e-147 | 419 |
Transcription factors information