Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0351 ATGAAGGAGAGACAACGTTGGACAACTGAAGAGGATGGTTTATTACGTGCTTATGTTAAACAGTATGGTCCTAGGGAATGGAATCTTGTGTCCCAACGCATGAACAAACCTCTTAACAGGGATGCCAAATCCTGCTTAGAAAGGTGGAAGAACTACCTCAAGCCCGGCATCAAGAAGGGGTCTCTTACTGAAGAAGAGAAATCTCTTGTCATCCATCTTCAACAGATTTACGGCAACAAATGGAAGAAAATTGCTGCAGAAGTCCCAGGTCGTACTGCTAAGAGATTAGGTAAGTGGTGGGAAGTATTTAAAGAGAAGCAGCAGAGAGAGAAAAAGGATATCAACAAAACAGTTGACCCAATTGATGACACCAAATATGATCACATACTTGAGACTTTTGCGGAAAAGCTTGTGAAAGAACGACCTTCCCCATCCTACCTCATGGCTGCCTCCAGTGGGGCCTTTATTCTCACTGATGCACCGGCTCCTCCATCAGCTATGCTTCCTTCTTTACTTTCAAATTCTAACAGCACTTTAGCCATTATGCCGCCTTCGCCTTCTGTGATGCTTAGTCTCTCTCCCTCAACTGTTGCTTCTTCACCTCCATTTCGATGGTTACAACCTGAGAAAATGACAGAGAATGCTTCTCCTGTTATTGGGAATGTAAAACCCCATGGAACTATTCCGGGTTTTGGTGATAACATGCTTGTATCTGAATTGGTTGAATGCTGTAAAGAATTGGAAGAAGGGCATCGGGTGTGGTCATTGCATAGGAAGGAAGCAGCATGGAGGTTAAGGCGGGTGGAGTTGCAGTTGGAGTCAGAGAAGGCATGTCGTATCCGGGAGAAGATGGAAGAGTTTGAAGCTAAGATTAAAGCTCTTTGGGAAGAACAGATGGCTACTTTGGATAGAATGGAAGCTGAATACCGGGAGCGGCTAGCTGAACTGAGAAGAGATGCGGAAACCAAGGAGCAGAAATTGGCTGCAAAGCACTCAAGGCTAAGTAAGTTTCTGGAACAAATAGGTTACAGGCCCAAGCTTACTGGGTCAAATGTAAGATGA 1062 0.4463 MKERQRWTTEEDGLLRAYVKQYGPREWNLVSQRMNKPLNRDAKSCLERWKNYLKPGIKKGSLTEEEKSLVIHLQQIYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREKKDINKTVDPIDDTKYDHILETFAEKLVKERPSPSYLMAASSGAFILTDAPAPPSAMLPSLLSNSNSTLAIMPPSPSVMLSLSPSTVASSPPFRWLQPEKMTENASPVIGNVKPHGTIPGFGDNMLVSELVECCKELEEGHRVWSLHRKEAAWRLRRVELQLESEKACRIREKMEEFEAKIKALWEEQMATLDRMEAEYRERLAELRRDAETKEQKLAAKHSRLSKFLEQIGYRPKLTGSNVR 353
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0351 353 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Alju07g0351 353 SUPERFAMILY Homeodomain-like 4 98 IPR009057 -
Alju07g0351 353 Gene3D - 62 120 - -
Alju07g0351 353 CDD SANT 6 53 IPR001005 -
Alju07g0351 353 FunFam MYB-related transcription factor 4 58 - -
Alju07g0351 353 Coils Coil 299 333 - -
Alju07g0351 353 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 1 347 - -
Alju07g0351 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 108 IPR017930 -
Alju07g0351 353 Gene3D - 4 58 - -
Alju07g0351 353 SMART sant 3 55 IPR001005 -
Alju07g0351 353 SMART sant 58 106 IPR001005 -
Alju07g0351 353 Pfam Myb-like DNA-binding domain 7 69 - -
Alju07g0351 353 CDD SANT 63 104 IPR001005 -
Alju07g0351 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 57 IPR017930 -
Alju07g0351 353 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju07g0351 Alju-ChrAlju07 4300040 4301101 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0351 1 344 MYB Transcription Factor Family AT2G37630 62.740 1.19e-147 419
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju07g0351 Myb_DNA-bind_6 7.4e-15 CL0123