Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0345 ATGGTTTCTTTCAGGGTGGTGGGAAGAGCCATTCCCACAGAGACAGATGAGCACCCCAAGATCTACCGGATGAAGCTTTGGGCCACCAACGAGGTCCGTGCCAAATCCAAGTTCTGGTATTTCCTTAGAAAGCCGAAGAAAGTGAAGAAAAGCAATGGGCAAGTGCTAGCCATTAACGAGATTTTTGAGAAAAACTCTACCAAGATTAACAACTATGGAATTTGGCTGCGATATCAAAGTCGAACTGGTTATCACAACATGTACAAGGAATACAGAGATACGACTCTCAATGGCGACGTCGAACAAATGTACAATGAAATGGCATCACGTCACCGGGTGAGGTTTCCATGCATCCAGATCATCAGGACAGCCACCATCCCTGCAAAGCTGTGCAAAAGGGAGAGCTCCAAGCAGTTCCACAATTCTAAAATCAAGTTCCCATTGGTGTTCAAGAAGGTTAGGCCACCAAGTAGGAAGCTGAAGACAACTTACAAGGCATCAAGGCCCAACTTATGGACCTACGAAGGTATCATCTCCTCTTTACTGTTGGTTGATTATGTATATAACTTCCTTCCTTTTCATGACTTAGAGCCATACCTCACTTCTTCACCTACCTTCATCAACCTCTCTTCTTCCTCTTCCAGGTTGGTTGTCAAGTCGCTCCTTTAA 669 0.4484 MVSFRVVGRAIPTETDEHPKIYRMKLWATNEVRAKSKFWYFLRKPKKVKKSNGQVLAINEIFEKNSTKINNYGIWLRYQSRTGYHNMYKEYRDTTLNGDVEQMYNEMASRHRVRFPCIQIIRTATIPAKLCKRESSKQFHNSKIKFPLVFKKVRPPSRKLKTTYKASRPNLWTYEGIISSLLLVDYVYNFLPFHDLEPYLTSSPTFINLSSSSSRLVVKSLL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0345 222 FunFam 60S ribosomal protein L18a 1 66 - -
Alju07g0345 222 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 3 123 IPR023573 GO:0003735|GO:0005840|GO:0006412
Alju07g0345 222 FunFam 60S ribosomal protein L18a 67 142 - -
Alju07g0345 222 Gene3D - 67 142 - -
Alju07g0345 222 Gene3D - 1 66 - -
Alju07g0345 222 Hamap 50S ribosomal protein L18Ae [rpl18a]. 1 64 IPR028877 -
Alju07g0345 222 PANTHER 60S RIBOSOMAL PROTEIN L18A 4 172 IPR028877 -
Alju07g0345 222 SUPERFAMILY RplX-like 67 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0345 Alju-ChrAlju07 4189752 4194009 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0345 3 172 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 86.471 6.70e-111 315