Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0292 ATGAGCAAAGCTTTGGCTGATAAAGGGTATTACAAGCAAAAAGGTGTAGTGAGAAAGGTGATTGACAAATATGTTGAGGAAATTGAAATGCTTGAAAGCAAGCATGTGCTCAAAGTTGATCAGGCAGAGCTTGAAACTGTGATCCCCCAAGTTGGTGGTCTTGTTAAGATTGTGAATGGAGCTTATCGCGGATCTACAGTGAGATTGTTAGGGGTTGATACTGATCACTTTTGTGCCAAAGTGCAGATTGAGAAAGGTCCCTATGATGGCAGAGTCCTCAAGGCAGTGGAATACGAGGATATTTGCAAATTAGGTCAGTGA 321 0.4206 MSKALADKGYYKQKGVVRKVIDKYVEEIEMLESKHVLKVDQAELETVIPQVGGLVKIVNGAYRGSTVRLLGVDTDHFCAKVQIEKGPYDGRVLKAVEYEDICKLGQ 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0292 106 Pfam KN17 SH3-like C-terminal domain 1 40 IPR041330 -
Alju07g0292 106 CDD KOW_KIN17 51 104 IPR041995 -
Alju07g0292 106 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 104 IPR037321 -
Alju07g0292 106 FunFam DNA/RNA-binding protein kin17-like 1 48 - -
Alju07g0292 106 Gene3D - 49 105 IPR014722 -
Alju07g0292 106 Gene3D - 1 48 - -
Alju07g0292 106 FunFam DNA/RNA-binding protein KIN17, putative 49 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0292 Alju-ChrAlju07 3342635 3342955 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0292 1 105 C2H2 Transcription Factor Family AT1G55460 80.952 5.17e-57 179