Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0280 ATGCTGGTTCACAGAGCTTACCCTAGAAGAGGAGGTGGGATAGTTGGCAGATTCGGCAATGACATCAACCGAAGAAGAGAGACGGCCAAATCATTGTTCATCACCTTCTTCCTTGAGAGCCATCTGACCAAAGAACGATTGAAGGGTAAAAGGAATTTTCATGAGCTTCTGGAGTTCAAGGTTGTATTGCAAAAGGTAAAAATTTTGAAAAGTTGCAAGGGAGATATTAACCCTAGATTGGATGTATCATGGGCAGATCTAGAATCATTTTTTCGACCATACAAAACTGGTATGGAGAGATCTTTGACTGCTTGGCTCATTCCCTGATTGACAATGGGTAAGAACGAGTTTCTCACACCAAAGGCAATAGCTAATCGAATCAAAGCAAAGGGGCTGCAGAAGCTTAGGTGGTACTGCCAGATGTGTCAGAAACAATGTCGAGATGAGAATGGGTTCAAGTGTCATTGCATGAGTGAAAGTCACCAGCGTCAAATGCAAATCTTTGGACAAAACCCAAATCGGATAGTTGAGGGCTATTCTGAAGAGTTTGAGAACACCTTTCTTGAGCACATGAAGCGCAGCCACCGGGTCAGTCGTATAGAAGCTACAGTAGTTTACAACGAATACATTAGTGATGGACATCACATTCATATGAATTCCACTCACTGGCTTACACTAACTGAGTTTGTCAAGTATTTGGGTCGGACTGGAAAGTGTAAGGTTGAAGAAACACCCAAGGGTTGGTTTATTACCTACATTGATAGAGACTCTGAGACTCTTTTCAAAGGGAGGATGAAGAATAAGAGAATAAAGTCTGACATGGCAGAAGAAGAGAAGCAAGAGAAGGAGATACAAAAACAAATAGAAAAGGCCGAGAAGTTGATGCAGCCATCTGTCTCTGGATCTGATCAGCCTTCACAGGCTGAACTTCTGAGAGAGTTAAAAGTGGAAGATGGAGTTAAGATTGTCTTTTCTCTTGGTCTATCTGCAAAACCTGTAACCAAGGAAAAAAGGGAGGGACCAAAGTTATTGTTCGATGAGGTTGAGGATGCCAAAAAGGAAGAAAGGAAACCTGGAGGCTCTTTGAAGAGGAAAGAAAGTGGAGGTGGAAATCAACCTTGGATGAATTGA 1131 0.4218 MLVHRAYPRRGGGIVGRFGNDINRRRETAKSLFITFFLESHLTKERLKGKRNFHELLEFKVVLQKVKILKSCKGDINPRLDVSWADLESFFRPYKTGMERSLTAWLIPXLTMGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQIFGQNPNRIVEGYSEEFENTFLEHMKRSHRVSRIEATVVYNEYISDGHHIHMNSTHWLTLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKGRMKNKRIKSDMAEEEKQEKEIQKQIEKAEKLMQPSVSGSDQPSQAELLRELKVEDGVKIVFSLGLSAKPVTKEKREGPKLLFDEVEDAKKEERKPGGSLKRKESGGGNQPWMN 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0280 376 Coils Coil 265 294 - -
Alju07g0280 376 MobiDBLite consensus disorder prediction 335 376 - -
Alju07g0280 376 FunFam DNA/RNA-binding protein KIN17, putative 172 271 - -
Alju07g0280 376 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 112 357 IPR037321 -
Alju07g0280 376 SUPERFAMILY beta-beta-alpha zinc fingers 137 175 IPR036236 -
Alju07g0280 376 MobiDBLite consensus disorder prediction 335 363 - -
Alju07g0280 376 Pfam Domain of Kin17 curved DNA-binding protein 163 288 IPR019447 -
Alju07g0280 376 Gene3D - 171 271 IPR038254 -
Alju07g0280 376 SMART Kin17_mid_2 163 289 IPR019447 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0280 Alju-ChrAlju07 3272280 3275351 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0280 112 366 C2H2 Transcription Factor Family AT1G55460 68.148 2.59e-124 363