Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0243 ATGTATGTTAATTGTCGTAATACAATTAGAAATGAGATAAATATGTATAAACCCTCTAGACCAGTACACTTAGCAATACCAGACGAAATGTTGATTAGTTTTTCGTCTGAGGACTCGCTCCAATTCCGGCGCATTTGGCCCCACCACCATGTGAATGTGTCTAGCTCCCTGTCCCAAATCGTCCTCGCCGTCGTCGGCCGTTATTCTCTCGTCAGGCACTGGAGAATCATTTCCACCATTGGGAGCGAAAGACATTTCAAAGCGGTCGGGTTTAAGATCATCTGCCGTCGAAGAAACTACAAGGGAGGCTTTAAGCTTAGATTCATCAGTTTCCGAAGGGTCGGATGTGAGGAATCGGGAATATCGAAGGATTTGAATTCGTCGGCATCAATGTCGGAGACGGGTAAGCCTATGGAGTTGAGGGAGGACTGGGTCAAGGAAGCAGATTCTGGTTTTCCAGGGAAACCAATAAAGGAGACAGCAAATTCTGAGAGGGATATCTCTATCTGGGGAATTTGTGTGCATGCAAAGGAGCGCGCGCTTGAACAAAAAGAACAAAAAAGTAACACAGTACGTATTCTCAAGCTAAACCGAGAGACCAGAACAATGGCTTCTTCCTCGTCCTCTCATTCTTCGAAGAAATACGATGTCTTCATCAGCTTCAGAGGCGAAGACACACGCGAAAGTTTCACCAGCCATCTTCACGCCGCTCTCTGTAGAAGCAAAATCGACACCTACGTCGATTACAGACTTGAGAAAGGAAGCGAGGTTTGGCCATCACTTGTCCAAGCCATTGATGATTCGATCCTGTTTCTGGTCGTTTTTTCTGAGAACTACGCTTCTTCTACTTGGTGCTTGAACGAGATCACCAAAATTATGCTCGATTGCTCTAAGGATCACGAGAATCGTGTTCTTCCAGTTTTCTTCAGGGTAAACCCTTCACATGTACGGAAACAACAAGGTAGTTACCGAGAAGCATTTCTAGAACACGAGCAAGGAAATCACAATGAGCAAGTGCAAATATGGAGGAGTGCTCTCACTCAAGCTGCTAATTTATCTGGCTGGGATTCTAGTACCTTCAGGAATGAAGCTGAGCTGATTGTAGAAATTGTCAAATGTGTTTTAAGGAAGTTGGAGCGTATCCACCGAATTGTTTATTTTGATGGTCTTGTTGGAATTCATGAACGAATTCTGCCTTTAGAGTTGTTCTTGAACAAGCAGTCAAAAGATGTTCGATTTGTTGGAATTTGGGGCATGGCTGGAATTGGCAAGACAACTATTGCAGCTGCAGTATTTAAGAAATATTGCTGTGATTATGAAGGGCTTTGCTTCATGTACAATGTAAGAGAAGAGTCAGAGAAGTGTGGGATCACTAATTTGAAGAATAAACTTCTTTCTAAATTATTAGATGATAAAGAATCTCAAGTTGGTATGCCTGATCGAGGAACTCCTTTGGATATGAAGAGGCTTAGACGAACAAAGGTTCTTGTTGTTCTTGATGACGTCAGTGACTCGGATCAACTCGAAATTTTAGCTGGAGCACATGAATGGTTTGGACCAGGCAGTAGAATCATTATAACATCTAGAGATAAACAAGTGCTTGTTAAACAAGTGGATCATATGTATGTGGTTAAAGCTTTGGACTTTGGTGAAGCCCTTCAGCTTTTCAATTTGAACGCCTTTAAAAATAATGTCATTGACAAAGAGTTTGGCTTATTATCAAGGAAGGTGGTTCTCTATGCAAAAGGGATTCCATTAGCTCTGAAAATCTTGGGTTCATTTCTTTATGGCAAAAGTGCAAATGAGTGGGAAAGTCAACTAGAAAAACTCAAGAGAATGCCTGACATGAAAATTCAAAATGTGTTGAAATTGAGTTATGAAGGATTAGATTTTCAACAGCAAAATATTTTTTTGGATATTGCATGCTTTTTCAAGGGCAGAGATGTGGATGACATTAAAAATCTGTTAGATGCCTGTGATTATGCAACGACCATTGGATTGAAAGCTCTTGAAGACAAAGCTCTTCTAACTATTACAGATGAGAAGGTATCTATGCATGATCTAATACAAGAAATGGCATGGGAGATAGTTCGGGGAGAATTAGAAGAAGAACCTGGAAAACGCAGCCGACTATGGGATTCAAATGATGTTTATGAAGTATTGAAATATAACACGGGAACTGAGTCCATCAAAGGCTTAGCTTTGGATATGTCAAAAATTGAGGATCTGACCTTAAGTCCTGAAGTCTTCGCCAGAATGCGCAAGCTTAAGTTTCTTATATTTTATAATTTTGGCTCAGATGAGTTCAGATTGTATCTTCCTCAAGACCTCAAATCTTTACCAAATGAACTCAGACTCCTTCAATGGGATAACTTTCCTTTAAAGTCCTTACCAAATACATTCTCGGCGGAGAAACTTGTTTCGTTTGAAATGTGA 2436 0.4068 MYVNCRNTIRNEINMYKPSRPVHLAIPDEMLISFSSEDSLQFRRIWPHHHVNVSSSLSQIVLAVVGRYSLVRHWRIISTIGSERHFKAVGFKIICRRRNYKGGFKLRFISFRRVGCEESGISKDLNSSASMSETGKPMELREDWVKEADSGFPGKPIKETANSERDISIWGICVHAKERALEQKEQKSNTVRILKLNRETRTMASSSSSHSSKKYDVFISFRGEDTRESFTSHLHAALCRSKIDTYVDYRLEKGSEVWPSLVQAIDDSILFLVVFSENYASSTWCLNEITKIMLDCSKDHENRVLPVFFRVNPSHVRKQQGSYREAFLEHEQGNHNEQVQIWRSALTQAANLSGWDSSTFRNEAELIVEIVKCVLRKLERIHRIVYFDGLVGIHERILPLELFLNKQSKDVRFVGIWGMAGIGKTTIAAAVFKKYCCDYEGLCFMYNVREESEKCGITNLKNKLLSKLLDDKESQVGMPDRGTPLDMKRLRRTKVLVVLDDVSDSDQLEILAGAHEWFGPGSRIIITSRDKQVLVKQVDHMYVVKALDFGEALQLFNLNAFKNNVIDKEFGLLSRKVVLYAKGIPLALKILGSFLYGKSANEWESQLEKLKRMPDMKIQNVLKLSYEGLDFQQQNIFLDIACFFKGRDVDDIKNLLDACDYATTIGLKALEDKALLTITDEKVSMHDLIQEMAWEIVRGELEEEPGKRSRLWDSNDVYEVLKYNTGTESIKGLALDMSKIEDLTLSPEVFARMRKLKFLIFYNFGSDEFRLYLPQDLKSLPNELRLLQWDNFPLKSLPNTFSAEKLVSFEM 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0243 811 Gene3D - 395 543 IPR027417 -
Alju07g0243 811 SUPERFAMILY Toll/Interleukin receptor TIR domain 204 355 IPR035897 -
Alju07g0243 811 FunFam Disease resistance protein (TIR-NBS-LRR class) 211 380 - -
Alju07g0243 811 Pfam TIR domain 214 383 IPR000157 GO:0007165
Alju07g0243 811 ProSiteProfiles TIR domain profile. 213 378 IPR000157 GO:0007165
Alju07g0243 811 Pfam NB-ARC domain 406 616 IPR002182 GO:0043531
Alju07g0243 811 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 373 640 IPR027417 -
Alju07g0243 811 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 215 811 IPR044974 GO:0006952
Alju07g0243 811 Gene3D - 547 630 IPR042197 -
Alju07g0243 811 Coils Coil 177 197 - -
Alju07g0243 811 Gene3D - 211 384 IPR035897 -
Alju07g0243 811 SMART till_3 214 352 IPR000157 GO:0007165
Alju07g0243 811 PRINTS Disease resistance protein signature 413 428 - -
Alju07g0243 811 PRINTS Disease resistance protein signature 489 503 - -
Alju07g0243 811 PRINTS Disease resistance protein signature 581 595 - -
Alju07g0243 811 SUPERFAMILY "Winged helix" DNA-binding domain 617 722 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0243 Alju-ChrAlju07 2833158 2836975 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0243 211 811 WRKY Transcription Factor Family AT4G12020 34.050 3.19e-93 319