Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0237 ATGAGAACTAAATCTCCTGGTGGAGGTAGGGCTAAAACTTCTACAAAACCTTCCCACCCTACCGCAAGGGCAATTCCTCGGGATGAAGATGATGCAGCTTTGCCTAAAACATTCAATGAGAGTAATCGTGATCTGCTAGATGGTAGGGAGGTGGGTTCAAAAGACAACGTGGATAATGTAAATGATGAGAGCTCTAATAGAATCCTTCATGAGAGTTTAGGTCATGACAACATTTGTATAGATGTTGCGGATAGAAAAATTTGCATCCGTTGCAATGAAGGTGGAGAAATATTAGTTTGCAGTGAGAGTGGTTGTCCTGTTGTTGTGCATGCAAAATGTATCAGCTGCGAACCTAAATTTGATGATACGGGAAACTACTACTGCCCTTATTGCTGGTTAAAACGAACACTGGAAGAGGTCCAAGTTTTGAGGAATAAGGCCTTAACAGCGAAGAAAGATTTGTCAGACTTTTTAGATAATAATGCAAATATGAGTAATAAATTGGCCCAAAAATATGGGGAAGAAAAAGGAAATGATTCCATCGAGTTATCCCTTGCGGGAAATGGGAGCTGCATGGATTATAGGAGTAGGAAGGGAAATGGCAGCACGTGCACACAGCCCTCACAGATAGTGGAAGATCAACAAAATCAAATGGAAGGAGTGACTCCTAATGCTGATCAACATGAAATAGCAATCGAAAATGACATTCATGCAAATGCTCACATAGCCAATACGGGTGATTCTATGCATCATGGGGGAGAAAATACACCAGAGCATATGGATCTGATTGATAAATCTATGACTAGGGAGAAAGTTGATGTTCCTAAAATTTCAGAAGCAAATAAAACCACATTTGTTGAAGGAAAAGAGGAGATTGAACCAGAGCATCCAAGATATAGTGATAGAAACGTTCATGAAGGGATTCCTGAGGATGAAGAGGAAGCATCTCCTTCGAGTTCATGCCATATGGGAAAACACAAAGATGGACTCTCACCTGATGTTCCATTTGTCAAACGGACACAAGAAAGTATTGCAGAAGATAATAAGGGCACAAGGCAAGATAGAGAGAAGTTGCTCCAGAATGAATCAAAATCAGTGGATACCTCTGTCAGTGAAACTAATGATTCAGGTTCTGAAGCTTTCTTAGTGAAGAAAAGACGTATCAAACATACGGCACAGAGGCATCCCTGGAGAGTTAAGAATGCTGAGGGTGAAAATGGTTGTCACGAAGATGAGGAAGTTACCAGTTCTGGAACTTTGAGACAGGCCCAGAAATCTTCTAAGCAAGGTGACAGCAAAAAACTAACTTTACCAACTAGAAAACGGAGGAGATTACACTGGACAACTGAAGAAGAAAATAAACTAAAGGAAGGAGTTTTAAAATTCTCAAAGGAAAACCAGAATATCCCTTGGAGGAAAATTTTAGGATATGGTGGTGATGTATTTGATGATACACGCACCCCAGTTGATCTTAAGGATAAATGGAGGACCATGACAGCGGGGGCAGGATCATATCATCCTCAGTACAAGTAG 1533 0.4064 MRTKSPGGGRAKTSTKPSHPTARAIPRDEDDAALPKTFNESNRDLLDGREVGSKDNVDNVNDESSNRILHESLGHDNICIDVADRKICIRCNEGGEILVCSESGCPVVVHAKCISCEPKFDDTGNYYCPYCWLKRTLEEVQVLRNKALTAKKDLSDFLDNNANMSNKLAQKYGEEKGNDSIELSLAGNGSCMDYRSRKGNGSTCTQPSQIVEDQQNQMEGVTPNADQHEIAIENDIHANAHIANTGDSMHHGGENTPEHMDLIDKSMTREKVDVPKISEANKTTFVEGKEEIEPEHPRYSDRNVHEGIPEDEEEASPSSSCHMGKHKDGLSPDVPFVKRTQESIAEDNKGTRQDREKLLQNESKSVDTSVSETNDSGSEAFLVKKRRIKHTAQRHPWRVKNAEGENGCHEDEEVTSSGTLRQAQKSSKQGDSKKLTLPTRKRRRLHWTTEEENKLKEGVLKFSKENQNIPWRKILGYGGDVFDDTRTPVDLKDKWRTMTAGAGSYHPQYK 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0237 510 MobiDBLite consensus disorder prediction 340 362 - -
Alju07g0237 510 Coils Coil 133 153 - -
Alju07g0237 510 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 173 IPR013083 -
Alju07g0237 510 ProSiteProfiles Myb-like domain profile. 439 499 IPR001005 -
Alju07g0237 510 MobiDBLite consensus disorder prediction 22 39 - -
Alju07g0237 510 MobiDBLite consensus disorder prediction 1 39 - -
Alju07g0237 510 SUPERFAMILY Homeodomain-like 446 501 IPR009057 -
Alju07g0237 510 SMART PHD_3 87 132 IPR001965 -
Alju07g0237 510 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 54 501 - -
Alju07g0237 510 MobiDBLite consensus disorder prediction 277 333 - -
Alju07g0237 510 SMART sant 443 501 IPR001005 -
Alju07g0237 510 MobiDBLite consensus disorder prediction 417 433 - -
Alju07g0237 510 ProSitePatterns Zinc finger PHD-type signature. 88 131 IPR019786 -
Alju07g0237 510 MobiDBLite consensus disorder prediction 277 449 - -
Alju07g0237 510 Pfam Myb-like DNA-binding domain 446 498 IPR001005 -
Alju07g0237 510 MobiDBLite consensus disorder prediction 363 378 - -
Alju07g0237 510 Gene3D - 447 509 - -
Alju07g0237 510 CDD SANT_TRF 447 499 - -
Alju07g0237 510 MobiDBLite consensus disorder prediction 396 416 - -
Alju07g0237 510 SUPERFAMILY FYVE/PHD zinc finger 84 138 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0237 Alju-ChrAlju07 2771255 2774910 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju07g0237 Myb_DNA-binding 1.6e-06 CL0123