Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0234 ATGGATTATAGGAGTAGGAAGGGAAATGGCAGCGCGTGCACACAGCCCTCACAGATAGTGGAAGATCAACAAAATGAAATGGAAGGAGTGACTCCTAATGCTGATCAACACGAAATAGCAATCGAAAATGACATTCATGCAAATTCTCACGTAGCCAATACGGGTGATTCTATGCCTCATGGGGGAGAAAATACACCAGAGCATATGGATCTGATTGATAAATATATGACTAGGGAGAAAGTTGATGTTCATAAAATTTCAAAAGCACATAAAACCACATTTGTTGAAGGAAAAAAGGAGATTGAACCAGAGCATCCCAGATATAGTGATAAGAACGTTCATGAAGGGATTCCTGAGGATGAAGAGGAAGCATCTCCTTCGAGTTCATGCCATATGGGAAAACACAAAGATGGACTCTCACCTAATGTTGCATTTGTCAAACGGACACAAGAAAGTATTGCAGAAGATAATAAGGGCACAAGGCAAGATAGAGAGAAGTTGCTCCAGAATGAATCAAAATCAGCGGATACCTCTGTCAGTGAAACTAATGATTCAGGTTCTGAAGCTCTCTTAGTGAAGAAACGACGTATCAAACATACAGCACAGAGGCATCCTCGGAGAGTTAAGAATGCTGAGGGTGAAAATGGTTGTCACAAAGATGAGGAAGTTATCAGTTCTGGAACTTTGAGACAGGCCCAGAAATCTTCTAAGCGAGGTCACAGCAAAAAACTGACTTCACCAACTAGAAAACGGAGGAGATTACACTGGACAACTGAAGAAGAAAATAAACTAAAGGAAGGAGTTTTAAAATTCTCAAAGGAAAACCGGAATATCCCTTGGAGGAAAATTTTAGAACATGGTGGTGATGTATTTGATGATACACGCACCCCAGTTGATCTTAAGGATAAATGGAGGACCATGACCACGGGGGCAGGTAAATTACTGATCATATCATCTTCAGTACAAGTAGCCTTCGTAATTTTTGGAGTCTTTGATTTCTTCAGACTAAGGGAAAGCAAGGCGTTTCTCTCAATCATGTTTTCTCAAGTCTTTCAGGCTGAGACATGGTTTAGTGTGATCAATAGCGAGACATTTATATCCAAATGTCCTGGCGTGGGTAAAATGTGGGGAAACCAAATAACTTGGCTTTCTCTACAAATAGCTTGA 1167 0.4053 MDYRSRKGNGSACTQPSQIVEDQQNEMEGVTPNADQHEIAIENDIHANSHVANTGDSMPHGGENTPEHMDLIDKYMTREKVDVHKISKAHKTTFVEGKKEIEPEHPRYSDKNVHEGIPEDEEEASPSSSCHMGKHKDGLSPNVAFVKRTQESIAEDNKGTRQDREKLLQNESKSADTSVSETNDSGSEALLVKKRRIKHTAQRHPRRVKNAEGENGCHKDEEVISSGTLRQAQKSSKRGHSKKLTSPTRKRRRLHWTTEEENKLKEGVLKFSKENRNIPWRKILEHGGDVFDDTRTPVDLKDKWRTMTTGAGKLLIISSSVQVAFVIFGVFDFFRLRESKAFLSIMFSQVFQAETWFSVINSETFISKCPGVGKMWGNQITWLSLQIA 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0234 388 MobiDBLite consensus disorder prediction 206 225 - -
Alju07g0234 388 MobiDBLite consensus disorder prediction 172 187 - -
Alju07g0234 388 MobiDBLite consensus disorder prediction 151 171 - -
Alju07g0234 388 MobiDBLite consensus disorder prediction 25 68 - -
Alju07g0234 388 Pfam Myb-like DNA-binding domain 255 307 IPR001005 -
Alju07g0234 388 MobiDBLite consensus disorder prediction 96 254 - -
Alju07g0234 388 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 248 307 IPR017930 -
Alju07g0234 388 SMART sant 252 310 IPR001005 -
Alju07g0234 388 MobiDBLite consensus disorder prediction 96 130 - -
Alju07g0234 388 SUPERFAMILY Homeodomain-like 255 309 IPR009057 -
Alju07g0234 388 Gene3D - 245 309 - -
Alju07g0234 388 MobiDBLite consensus disorder prediction 235 251 - -
Alju07g0234 388 ProSiteProfiles Myb-like domain profile. 248 308 IPR001005 -
Alju07g0234 388 CDD SANT_TRF 256 308 - -
Alju07g0234 388 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 56 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0234 Alju-ChrAlju07 2732374 2744255 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju07g0234 Myb_DNA-binding 8.4e-08 CL0123