Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0220 ATGGCCCCAACGCCACAAGTTATTACATGCAAAGTTGAGACTGAAGAATCTGTGCCGATTTTGGGGATTGGGAATAATGCAGGTGCTGTATGGCGGGGAGGCGGAGAAAACGATGTGAGGGTGGAAGACATACAAGTAGATCCGCCCAAATCAAGCGAAGTTCGGGTCAAGTTGGTTTGTGCCAGTATCTGCCACACCGACCTCGTTTGGGCTTCAGGATTTCCCCTCCCTTTGTTTCCTCGAGTATTAGGGCATGAAGGGGTTGGTGTTGTTGAGAGCACTGGGGAGGAAGTAACAGATCTAAAAGTAGGCGATGTTGTGATCCCAACATATATTGGAGAATGTCAAGAATGTGAGAATTGCATTTCAAGGGAATCCAACTTTTGCCTGAAGTACCCCATGAGAATAAGCGGCTTAATGATGGATAACACGTCAAGGATGTCCATAAGGGATCAAAAGATATTCCATCTCTTTAGTTGTTCCACATTTGCAGAGTACATGGTAACTGATTCAAATTACCTGGTAAAAGTTGATCCCAACATTGACCCAGCCCATGCTAGCTTCATTTCGTGTGGGTTCTCAACTGGTTTTGGAGCTGTTTGGAAGGAAGCCAGGGTTGAAAGTGGCTCATCCGTCGCTGTTTTTGGCCTTGGTGGTGTTGGTTTAGGGGCTATAAGCGCGGCCAAAATGATGGGGGCAACTAAGATAATTGGGATTGACAAAAATGAGAAGAAGAAATCAAAAGGAGAAGCTTTCGGAATGACAGATTTTATCAATCCTGGGGCATCTGTTAAATCAGCATCAGAGTTGATCCAGGAACTAAGTGGTGGAATGGGTGTAGATTATTCATTTGAGTGCACTGGAGTTGGCCCCTTGCTTTCTCAAGCCCTGCAAGCCACAAAAATGGGTAAGGGAAAGACAATAGCCATTGGTTCAGTAACTGAAGAAAATGTGCCCATCCACTTTCGTTCTATTTTACTTGGGCGAACTTTAAAGGGTTCCCTTTTTGGAGGACTAAAACCCAAATCTGACCTGCCATTCATAGCTCACAAATGCCTGAAAAAGGAGTTTCCTCTTCATGAACTTGTAACTCATGAGGTGTCTTTGACAGATATAGACAAAGCTTTGGAGCTATTAAAACAGCCAGATTGTGTCAAAGTTGTCATTAGGATTTAG 1176 0.4413 MAPTPQVITCKVETEESVPILGIGNNAGAVWRGGGENDVRVEDIQVDPPKSSEVRVKLVCASICHTDLVWASGFPLPLFPRVLGHEGVGVVESTGEEVTDLKVGDVVIPTYIGECQECENCISRESNFCLKYPMRISGLMMDNTSRMSIRDQKIFHLFSCSTFAEYMVTDSNYLVKVDPNIDPAHASFISCGFSTGFGAVWKEARVESGSSVAVFGLGGVGLGAISAAKMMGATKIIGIDKNEKKKSKGEAFGMTDFINPGASVKSASELIQELSGGMGVDYSFECTGVGPLLSQALQATKMGKGKTIAIGSVTEENVPIHFRSILLGRTLKGSLFGGLKPKSDLPFIAHKCLKKEFPLHELVTHEVSLTDIDKALELLKQPDCVKVVIRI 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0220 391 FunFam S-(hydroxymethyl)glutathione dehydrogenase 196 334 - -
Alju07g0220 391 SUPERFAMILY GroES-like 342 390 IPR011032 -
Alju07g0220 391 SMART PKS_ER_names_mod 35 389 IPR020843 GO:0016491
Alju07g0220 391 Gene3D - 37 386 - -
Alju07g0220 391 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 84 98 IPR002328 GO:0008270|GO:0016491
Alju07g0220 391 Pfam Zinc-binding dehydrogenase 219 338 IPR013149 -
Alju07g0220 391 PANTHER ALCOHOL DEHYDROGENASE 37 383 - -
Alju07g0220 391 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 181 352 IPR036291 -
Alju07g0220 391 Gene3D - 196 334 - -
Alju07g0220 391 FunFam alcohol dehydrogenase 1-like isoform X1 35 195 - -
Alju07g0220 391 Pfam Alcohol dehydrogenase GroES-like domain 52 177 IPR013154 -
Alju07g0220 391 SUPERFAMILY GroES-like 37 206 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0220 Alju-ChrAlju07 2597973 2603167 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0220 52 383 Monolignol Biosynthesis Gene Families AT2G21730 25.223 4.73e-15 74.3