Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0218 ATGGGTTATATATGTGACTTTTGCGGAGATCAGAGGTCCATGGTGTACTGCCGTTCTGATGCTGCATGTTTATGTTTATCATGTGATCGAAATGTTCATTCTGCTAATGCTCTTTCTAAGCGTCATCAAAGAACCCTTTTATGTGAGAGATGTAATTCACAACCCGCTCTTGTACGGTGTTCTGAAGAGAAGATTACACTATGTCAGAACTGCGATTGGTTAGGTCATGGTCCTACTACATCTTCTTCAACACATAAGAGGCAAACGGTCAATTGCTACTCTGGCTGTCCTTCAGCAGAAGAATTTTCTTCAATATGGTCATTTGTCTTGGATATCCCTTCCATGGGTGAAAAAACTACTTGCGAGCAGGAACTAGGTTTGATGACCATTAATGAGAACGGCAAAAAAAGTGCTTGTGTTCCTGCAGAAAGCCAGAATGTATCTGGTTCAGCTCAAGTAACTGATTTAGACAGCTTCAATAAGTCTTGGGCTGGGGCCTCTGCAATACCTGAGTCAAGCTCAGAACCTCATATTCTAGACCCATCAACTGGACCTACAAATGAATGTTTGCCCAAGTTATACTGTCCCGGTACAAAAAGTCCTGCACCATATGAAAATGATGAAGATGATAACCTGTATGGTGATTTTGAGATGGATGAAGTGGATCTGGATCTTGAGAACTATGAGGAACTTTTTGGAATGACTCTTAGTCATTCTGAAGAACTCTTTGAAAATGGTGGAATTGGTAGCTTGTTTGGGACAAAGGATGTGTCTGCTGGTGGGGATTCTAATTGTCAGGGATCTGTTGCTGCCGAGGGTTCACCGACTGGACTGGTCAATGCAGTGCAACCAGCGTACAGCAATGCAGCCTCTGCTGATTCAATCATGAGCACTAAAACTGAACCGATTCTTTGTTTTGCGGGGAAGCAAGCACAATCAAATCTTTCTTTTTCCGGGGTCACTGGAGATAGTAGTGCTGGAGATTATCAAGACTGTGATGCTTCTTCAATGCTTCTCATGGGAGAGCCTCCTTGGTGTCCTCCTTGTCCTGAGAATTCAATACAATCTGCCAACCGCAGCAACGCTGTCATGCGTTATATGGAAAAGAAGAAGACACGCAAGTTTGACAAAAAAGTGAGGTATGCCTCTCGCAAGGCAAGAGCCGATGTCCGAAAGCGCGTGAAGGGCCGGTTTGTCAAAGCTGGGGAAGCTTATGATTATGACCCTTTGAGCCCAACCAGAAGCTATTGA 1251 0.4396 MGYICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSKRHQRTLLCERCNSQPALVRCSEEKITLCQNCDWLGHGPTTSSSTHKRQTVNCYSGCPSAEEFSSIWSFVLDIPSMGEKTTCEQELGLMTINENGKKSACVPAESQNVSGSAQVTDLDSFNKSWAGASAIPESSSEPHILDPSTGPTNECLPKLYCPGTKSPAPYENDEDDNLYGDFEMDEVDLDLENYEELFGMTLSHSEELFENGGIGSLFGTKDVSAGGDSNCQGSVAAEGSPTGLVNAVQPAYSNAASADSIMSTKTEPILCFAGKQAQSNLSFSGVTGDSSAGDYQDCDASSMLLMGEPPWCPPCPENSIQSANRSNAVMRYMEKKKTRKFDKKVRYASRKARADVRKRVKGRFVKAGEAYDYDPLSPTRSY 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0218 416 ProSiteProfiles CCT domain profile. 359 401 IPR010402 GO:0005515
Alju07g0218 416 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 404 - -
Alju07g0218 416 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Alju07g0218 416 SMART bboxneu5 4 47 IPR000315 GO:0008270
Alju07g0218 416 CDD Bbox1_BBX-like 4 47 - -
Alju07g0218 416 Pfam CCT motif 359 401 IPR010402 GO:0005515
Alju07g0218 416 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Alju07g0218 416 CDD Bbox1_BBX-like 47 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0218 Alju-ChrAlju07 2577052 2581158 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0218 1 416 C2C2-CO-like Transcription Factor Family AT3G07650 55.478 7.09e-155 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Alju07g0218 CCT 7.8e-17 CL0281