Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0209 ATGGAAGGTAGGAAATGTTCAATGATCAAAGATATTGATCAAAGCACTGATATGTGGAGGATTGTTGTACGGGTATTGAGGAGGTGGAATAGTTATCAGAAGGACTCACCAACTCAGTTGTATGCTATCTGTTTACTTCTGATGGATCAAGAGGGAAGTAAGATCCAAGCTTCAATCATGAACAAGTATCTCTTCAAGCAGTTTGAGAAAGACCCTGTTGAAGGTCGTTCTTATTTTATTGCAAATCTAGAGGTGATACCTAATGGGAAGGACTACAAGGCTGCTAAGCACAAGTTTAAACTCCTTTTTAACTCAGCCACTTATGTGAAAGAAGAGGTTGCTCCAATTCCTCAAACTGTTTTCAGCTTCTTTCCTATTAAAGACATACTGTCTCAAACTGTTCAGAAGCATACCATGTACCTATTTGATGTCATTGGCTTTGTCATAAGTATTTGCCCTTTGGAAGAATATCGTTCAGGATCAGAGGTTAAGAATAAGATACGGGTTACATTGTGTGATGAGAGGGAGAATACTGTCCAGATGGTTTTGTATGATGAGTGTGCGTTAAATCTATGTATGAACGATTTCAATGGTATGCAGAAGCCTATAGTGTTGATTGCTCAGCTTGCAAGGGTTGGTTTTGATGACAGTGGTGTACCAGAGGTGTGCAGCTCTTACCATGCAACCAAGATACACTTGAATGGGAAGTTCCCAGAGGTTAAACAATTTCTTGCAAGTGCTCATAACTTGCCATCACCAATGTTGAATTCATTGAGTGAAAGTGTTGAGTCCCAGAGGTCTAATTCTGCTGTTGAAAGTATTTTGAAGAACACACCCAGAGTCAAAGTATCTGACATCTCTAATCAGGAATTGGACAAGTATTTTGCTGTTTTATGTGAGTTTAAGAAATTTGAGACTCGTCATGGCTGGGTTTATGAGGGGTGTGCAAGGTGTGGCACTAAACCAAAAGTTCAGAATGGATCAGCTTCATGTGGCAGCAATTACTGCAAGGGGAAACCCTGTAGCATCCAATCAAAGCTAAGGCTTAATTACCTGATTGGTGATGATTCTGGAACTGCATCAGTTGTCCTTTTCGACAAGCATGCATCTGAGCTTATGAAGAAAAATGCAGCTGAACTGAAAGCAGATATTCCTAAGGACGAAATTGAGTATGAGTTCCCGAGTGAAATAAACAGCTTGATTGGGAAGAAAATGATCTTAAAGATGAAGTTGAACAAGTACAACAAGGAACACTCAAATTCAAGTGTATCAGTTGCATCATATGCTGAGTGTGCTGACTTAATCGATGAGTTTAATGAAGCTGCTTCTCAGATTGGAGAGCCAAGTGAATTAGTCAATGATGAGGAGGACGATGTTATCTTCATGAGCAATGCCACTACTGAAGATAAGGGAACAACAGTTACTGACGAATGTGTTATGCTCTCTGAAAATTTCCCCCCTATGGAGTTAGATGGAGTTTCTCTTTCTGATGTCATCCCTCCAGCTCCTTCAAAGGGGAAGAGGAAGGTTATTTCAAAGAAACCTGCTGCCCAAGGTGCAAAGAGTGTCGGAATTGGACCTGATTCTCCAGCAAAATCATCTGCAAAACCAATGAAGGCAATTAAGCAGGAGAAGAATTGA 1641 0.4034 MEGRKCSMIKDIDQSTDMWRIVVRVLRRWNSYQKDSPTQLYAICLLLMDQEGSKIQASIMNKYLFKQFEKDPVEGRSYFIANLEVIPNGKDYKAAKHKFKLLFNSATYVKEEVAPIPQTVFSFFPIKDILSQTVQKHTMYLFDVIGFVISICPLEEYRSGSEVKNKIRVTLCDERENTVQMVLYDECALNLCMNDFNGMQKPIVLIAQLARVGFDDSGVPEVCSSYHATKIHLNGKFPEVKQFLASAHNLPSPMLNSLSESVESQRSNSAVESILKNTPRVKVSDISNQELDKYFAVLCEFKKFETRHGWVYEGCARCGTKPKVQNGSASCGSNYCKGKPCSIQSKLRLNYLIGDDSGTASVVLFDKHASELMKKNAAELKADIPKDEIEYEFPSEINSLIGKKMILKMKLNKYNKEHSNSSVSVASYAECADLIDEFNEAASQIGEPSELVNDEEDDVIFMSNATTEDKGTTVTDECVMLSENFPPMELDGVSLSDVIPPAPSKGKRKVISKKPAAQGAKSVGIGPDSPAKSSAKPMKAIKQEKN 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0209 546 CDD RPA1_DBD_B_like 143 246 - -
Alju07g0209 546 SUPERFAMILY Nucleic acid-binding proteins 9 111 IPR012340 -
Alju07g0209 546 CDD RPA1_DBD_A_like 20 109 - -
Alju07g0209 546 SUPERFAMILY Nucleic acid-binding proteins 279 421 IPR012340 -
Alju07g0209 546 Pfam Domain of unknown function DUF223 45 138 IPR003871 -
Alju07g0209 546 MobiDBLite consensus disorder prediction 492 546 - -
Alju07g0209 546 Gene3D - 4 111 IPR012340 -
Alju07g0209 546 PANTHER OS03G0429900 PROTEIN 8 422 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Alju07g0209 546 SUPERFAMILY Nucleic acid-binding proteins 121 247 IPR012340 -
Alju07g0209 546 Gene3D - 115 251 IPR012340 -
Alju07g0209 546 Pfam Replication factor-A C terminal domain 294 420 IPR013955 -
Alju07g0209 546 Gene3D - 259 446 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0209 Alju-ChrAlju07 2490456 2492936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0209 19 417 Core DNA Replication Machinery Family AT5G08020 22.695 2.65e-14 73.9