Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0183 ATGGCGGATTCGGATAACGAATCGGGTGGGGGGAACGGCGGCAATGTGAACAGCGATTTTTCGACGAAGGAGCAGGATAGGTTTTTGCCGATAGCGAACGTGAGTAGGATAATGAAAAAGGCGTTGCCGGCGAACGCGAAAATCTCGAAGGACGCGAAGGAGACGGTGCAGGAGTGTGTGTCTGAGTTTATAAGCTTTGTGACAGGGGAGGCGTCGGACAAGTGCCAGAGGGAGAAGAGGAAGACGGTCAACGGCGACGATTTACTGTGGGCCATGACCACTTTAGGGTTCGAGGATTATGTGGAGCCCTTGAAGATTTACCTACAGAAGTATCGGGAGATGGAAGGGGAGAAGACTTCCCTTGGGAGGCACGGCGAGAAGGACGGTGGCGGCTCCGGCGGAAGTGGGGTTGTTGGGTTTAATGGCGCAGAGGGTATGTACGGTGGGATGACGATAGGGCATCATCAGGGACAGGTGTACGGTTCTGGTGGGTTTAACCCAGGCAACGGTGGTGGTGGGGGCTCCAATATGAGATCCAGTAAAATATCTAAAGGCAGGGATGGCTGTGAAGAAGAGTTCTGA 582 0.5378 MADSDNESGGGNGGNVNSDFSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTVNGDDLLWAMTTLGFEDYVEPLKIYLQKYREMEGEKTSLGRHGEKDGGGSGGSGVVGFNGAEGMYGGMTIGHHQGQVYGSGGFNPGNGGGGGSNMRSSKISKGRDGCEEEF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0183 193 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 13 142 IPR027113 GO:0001228|GO:0006355|GO:0016602
Alju07g0183 193 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 28 92 IPR003958 -
Alju07g0183 193 SUPERFAMILY Histone-fold 25 129 IPR009072 GO:0046982
Alju07g0183 193 MobiDBLite consensus disorder prediction 158 193 - -
Alju07g0183 193 Gene3D Histone, subunit A 17 136 IPR009072 GO:0046982
Alju07g0183 193 ProSitePatterns NF-YB/HAP3 subunit signature. 59 75 IPR003956 GO:0005634|GO:0006355|GO:0043565
Alju07g0183 193 PRINTS CCAAT-binding transcription factor subunit A signature 56 74 - -
Alju07g0183 193 PRINTS CCAAT-binding transcription factor subunit A signature 94 112 - -
Alju07g0183 193 PRINTS CCAAT-binding transcription factor subunit A signature 75 93 - -
Alju07g0183 193 MobiDBLite consensus disorder prediction 1 23 - -
Alju07g0183 193 FunFam Nuclear transcription factor Y subunit B-3 17 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0183 Alju-ChrAlju07 2243318 2244036 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0183 1 155 CCAAT-HAP3 Transcription Factor Family AT4G14540 77.500 6.96e-76 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Alju07g0183 CBFD_NFYB_HMF 2.4e-27 CL0012