Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0080 ATGGCAACAATGTCGGATGACATGCTTGTGCATTTCTCGTCCAACTCCTCCAATCAATCGGATCAGTCCTTGCCTACTAAGATTGCAAAGCTTGAAGCTCGAATGGTAGGCAAGGGTTCGTCTGCAGTTGCCACCACTCTGTCGTCTGCCCAGCAGTCAACTTGGTCTTCTGTTCCTTCAGCTGCGAAATTTGGGGGACCTGCCGAGGATTTGGCGGGACCCTCCACTTCGAGTGATTCCGATGATGATAACGGTGGGGAATTCCTTATACAAGCTAACACACAGAAGCGCCAAAAACTTCAAGAAGACGGCCACTCAAAGATTTTTGAACATGTTGAGGTGGTTACTGATGGAAGGCAAACTAGTTCGGATGTTGTGGAGGCAAAAGTTAGTGCTGATGTGAATAGGAAAAAAAATGGTCGTGGAAGAGGGAGTTCTGGTTCAGGTAGGGGACGTGGTTCCAGAGTTACTGATCAAACCAGAACACAAATTTCTCCTCCAGCAGTTTTGGCCTCCAATGGTCAGCTCGACATTGCATGCCATAGAGAGGTAAGACTCAGAGATCAGATTCGCAATGACAATTGCACTTCATTAGAGGAGGAGAATGCATCTTTACGTGCAAAAGTTGTTGCCATGGAGGAGGACCTGCGGAAATCAAAACAAGAGATATCTGATTACCAAAACCTTTGTCGCCAATTAGAAAAGGAGCTAAAGGACCTGAAAGATCATGAACAGCAAATGAAGCCTAAGAGGACAAAAATAATATCTGATCTGCTGATATCAGTTTCAAAGTCTGAGAGGCAGGAAGCAAGGTTGAAAGTACGACAAGACTCATTGAGACTAGGAAATGTTGGTGTAATCAGAGCTGGAACTATCATATCTGAGACTTGGGAAGATGGGCAAGCGTTGAAGGATCTTAATGCGCAACTTAAACAACTGATAGAAACAAAAGAGGCTATCGAGCGGCAGCGCAAGTTGTTGAAGAAAAAACAATCTGATAAAGGTGAGGGAGCAGATGCAGATACTGGATTACAAGAAGATGAAGTCATCATTCAGGATGAAATCTACAAGTCTCGACTATCTAGCATTAAACGTGAAGAAGAAGTTATTATGCGGGAGAGGGATCGCTATGAGCTAGAAAAGGGTAGACTAATACGTGAGATGAAACGTATACGAGATGAGGATGGTTCTCGTTTTAACAACTTTCAGATTCTGAACCATCGATATGCCCTGTTAAATCTTCTTGGAAAGGGGGGATTCAGCGAGGTTTACAAGGCTTTTGACTTGTTGGAGCATAGATACGTTGCATGTAAGCTTCATGGTTTAAATGCTCAATGGAGTGAAGAGAAGAAGCAGAGTTACATTCGGCATGCAATTCGGGAGTATAATATCCACAAGACCTTGGTACATCATCACATTGTTCGTTTGTGGGACATCTTTGAGATAGATCACAATACATTCTGCACCGTTTTAGAGTACTGTAGTGGGAAGGATCTTGATGCTGTCCTCAAGGCAACACCTATATTGCCTGAGAGAGAGGCTAGGGTAATTCTTGTTCAGGTTTTTCAAGGCCTTGTTTACTTGAATAAAAGAACACAGAAGATTATTCATTATGATTTGAAGCCTGGAAATGTTTTGTTTGATGAGCTTGGCATTGCCAAAGTGACTGATTTTGGTCTCAGCAAAATAGTTGAGGATGATGTGGGATCCCAGGGTATGGAACTAACATCTCAGGGGGCTGGAACTTACTGGTATTTGCCTCCGGAATGCTTTGAGCTCAGTAAGACACCTCTTATATCATCAAAGGTTGATGTCTGGTCTGCTGGTGTTTTGTTCTATCAAATGCTCTTTGGAAGACGCCCATTTGGCCATGACCAAACTCAAGAGCGTATACTACGTGAAGATACAATTATCAAGGCTCGCAAGGTTGAATTCCCTACTAGACCTACAGTTTCTAATGAGGCAAAGGATTTTATACGGCGATGTCTGACGTATAACCAGGCCGAGAGACCAGATGTATTGACCATTGCTCAAGATCCATATCTTACCTACTCAAAGAAGTAA 2064 0.4317 MATMSDDMLVHFSSNSSNQSDQSLPTKIAKLEARMVGKGSSAVATTLSSAQQSTWSSVPSAAKFGGPAEDLAGPSTSSDSDDDNGGEFLIQANTQKRQKLQEDGHSKIFEHVEVVTDGRQTSSDVVEAKVSADVNRKKNGRGRGSSGSGRGRGSRVTDQTRTQISPPAVLASNGQLDIACHREVRLRDQIRNDNCTSLEEENASLRAKVVAMEEDLRKSKQEISDYQNLCRQLEKELKDLKDHEQQMKPKRTKIISDLLISVSKSERQEARLKVRQDSLRLGNVGVIRAGTIISETWEDGQALKDLNAQLKQLIETKEAIERQRKLLKKKQSDKGEGADADTGLQEDEVIIQDEIYKSRLSSIKREEEVIMRERDRYELEKGRLIREMKRIRDEDGSRFNNFQILNHRYALLNLLGKGGFSEVYKAFDLLEHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLVHHHIVRLWDIFEIDHNTFCTVLEYCSGKDLDAVLKATPILPEREARVILVQVFQGLVYLNKRTQKIIHYDLKPGNVLFDELGIAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGVLFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPTRPTVSNEAKDFIRRCLTYNQAERPDVLTIAQDPYLTYSKK 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0080 687 PANTHER MIXED LINEAGE PROTEIN KINASE 4 686 - -
Alju07g0080 687 SMART serkin_6 409 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g0080 687 ProSitePatterns Protein kinases ATP-binding region signature. 415 438 IPR017441 GO:0005524
Alju07g0080 687 ProSiteProfiles Protein kinase domain profile. 409 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g0080 687 Coils Coil 374 394 - -
Alju07g0080 687 MobiDBLite consensus disorder prediction 1 26 - -
Alju07g0080 687 MobiDBLite consensus disorder prediction 39 87 - -
Alju07g0080 687 Pfam Protein kinase domain 410 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g0080 687 MobiDBLite consensus disorder prediction 41 60 - -
Alju07g0080 687 MobiDBLite consensus disorder prediction 73 87 - -
Alju07g0080 687 SUPERFAMILY Protein kinase-like (PK-like) 401 683 IPR011009 -
Alju07g0080 687 MobiDBLite consensus disorder prediction 118 167 - -
Alju07g0080 687 Coils Coil 303 333 - -
Alju07g0080 687 Gene3D Transferase(Phosphotransferase) domain 1 400 687 - -
Alju07g0080 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Alju07g0080 687 MobiDBLite consensus disorder prediction 8 26 - -
Alju07g0080 687 MobiDBLite consensus disorder prediction 150 167 - -
Alju07g0080 687 CDD STKc_TLK 408 681 - -
Alju07g0080 687 Coils Coil 195 246 - -
Alju07g0080 687 FunFam Serine/threonine-protein kinase TOUSLED 400 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0080 Alju-ChrAlju07 892987 904961 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0080 392 687 MAP Kinase Kinase Kinase AT3G13530 28.094 2.77e-28 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Alju07g0080 Pkinase 1.4e-59 CL0016