Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0073 ATGTTTTGCAAGATTGCGAGGGTTCCCCTCTTCTACCTAACAAATATAGAGACGAGCTTCGCGAACTTGTTTTCTTCATCGGTACGTAGCCACCATTCCGTTAACGCATTGATCCTGAGAGGTCAAGGCAAGAGAGACAGAGAAGGAGGGATGGATTTTGAACTGCGAAGAGCGAAAGAAAGACTAGAAAGAGAGCAGAAGGAGTGGATGGAGAAGGCCCGGTTGAAAGTCGAGAAGGAAAGGAAGGCTCAACAAGAGGCTAAGAATCAAAGGGATGCCATTGAAGCTGTTCGAAGATCTCGCCGTATTGATGCTGCCAAAGCTCGACGAAAGGCTGAGGAACAGATGCAAGAAAGCTTACTTACTGGAAGAGGAATTGTGTTTTACCGTTTATTAGAAGCTATAACTTGTGAAGGTAATGGGGATAAGATCAAACTGCCACCTTCATGCTTCACAGAATTGTCTGATCAGGGTGCCCTTGATAAGGGACCCATGTACTTTCAGTTGTCAGTAGTTCATGGGGAGGGTTCTTCAGGCACAAAACCTACTGGTGAAGAGAACCAAGGGACCACCCATTCAGGAGTTTTAGAATTCACTGCTGATGAAGGTTCAGTGGGTCTTCCTCCTCATATATGGAATAATTTGTTTGCTGACATCACTCCTAAGTCTCCATTAGTGGAAGTCCGTTATGTTGGGCTTTCAAAGGGGACTTATGCAAAACTTCAACCTGAAAGGGCAGGATTTTCTGATTTGCCAAATCATAAGGCTATCCTTGAAACAAGTCTTCGGCAACATGCAACTCTTTCTCAAGGTGATATTTTAACAGTCAACTATGGGGAACTTGCTTATAAATTGAGGGTGCTTGAGCTGAAACCTTCTTCAAGTGTATCTGTCTTAGAAACAGATATCGAAGTTGACATTGTTAATCCTGATGCAAGCTTAGAAAAGAGTGATCAGCATGTTTTACTCCTGCTTGAATTTGGCATGCCACAATCTGCAATGGTAGACGAAGGAAATTTTGTATACTACAAATTCTCAATAGACAACAGCACCTGGGAGAGAATTGTTGCCGAGAATTCAAGTATTGAGGTAAAATTGGAAGCTGAGACAGGTGGCGGAGACACTGATCTTTTTATATCTAGACATCCTCTGATATTTCCTACTCGACACCAGCATGAGTGGTCGTCCCATGATGTTGGCTCAAAGGCTTTGATTCTTAGCTCTAAAGATAAGAACTTTGGGGCTGGGACGTACAGCATTGGAGTTTTTGGATTTAAGGGAACAACCAAATTCAAAATATCTGTGGCAATTCAGGAAATTTTCCACCAGAAAATAGGTCAACAAGCATCATCGTCTATGTCACATATGGAGACAGACACTGAACAGTGCCGGAATTGTAGGCATTACATACCTAGTAGGACTGTTGCATTGCATGAAGCTTATTGTAGCAGACATAATGTTATATGTCAACATGCTGGTTGTGGAGTTGTTCTTAGGATTGAGGAGACCAAGAACCACATTCATTGTGACAGGTGTGGTAAAGCTTTTCAGCAGGGAGAATTGGAAAAGCACACGAAGGTCTTCCACGAGCCTCTTCAATGTCCTTGTGGTATAATCCTTGAGAAAGAACAAATGGTTGAACACCAAGCTTCAGAGTGTCCCATGCGATTAATTGCATGCCGCTTCTGTGGCGACATGGTTCAAGCTGGAAGTTGCGCAGTTGACATCCGTGACAAGATGAGAGGGTTAACTGAACATGAGAGTGTTTGTGGATCAAGGACAGCCCCATGTGATTCTTGTGGGCGTTCAGTGATGTTGAAGGACATGGACATTCACCACATTGCTGTTCATCAACGAGGTTGA 1863 0.4337 MFCKIARVPLFYLTNIETSFANLFSSSVRSHHSVNALILRGQGKRDREGGMDFELRRAKERLEREQKEWMEKARLKVEKERKAQQEAKNQRDAIEAVRRSRRIDAAKARRKAEEQMQESLLTGRGIVFYRLLEAITCEGNGDKIKLPPSCFTELSDQGALDKGPMYFQLSVVHGEGSSGTKPTGEENQGTTHSGVLEFTADEGSVGLPPHIWNNLFADITPKSPLVEVRYVGLSKGTYAKLQPERAGFSDLPNHKAILETSLRQHATLSQGDILTVNYGELAYKLRVLELKPSSSVSVLETDIEVDIVNPDASLEKSDQHVLLLLEFGMPQSAMVDEGNFVYYKFSIDNSTWERIVAENSSIEVKLEAETGGGDTDLFISRHPLIFPTRHQHEWSSHDVGSKALILSSKDKNFGAGTYSIGVFGFKGTTKFKISVAIQEIFHQKIGQQASSSMSHMETDTEQCRNCRHYIPSRTVALHEAYCSRHNVICQHAGCGVVLRIEETKNHIHCDRCGKAFQQGELEKHTKVFHEPLQCPCGIILEKEQMVEHQASECPMRLIACRFCGDMVQAGSCAVDIRDKMRGLTEHESVCGSRTAPCDSCGRSVMLKDMDIHHIAVHQRG 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0073 620 Coils Coil 59 100 - -
Alju07g0073 620 PANTHER UBIQUITIN FUSION DEGRADATON PROTEIN 1 75 565 IPR004854 GO:0006511
Alju07g0073 620 Pfam Ubiquitin fusion degradation protein UFD1 140 310 IPR004854 GO:0006511
Alju07g0073 620 Gene3D - 235 308 - -
Alju07g0073 620 Gene3D - 127 233 IPR042299 -
Alju07g0073 620 ProSitePatterns Zinc finger C2H2 type domain signature. 597 617 IPR013087 -
Alju07g0073 620 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 527 576 IPR013083 -
Alju07g0073 620 Gene3D - 325 436 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju07g0073 UFD1 1.9e-47 CL0402