LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju07g0071	ATGGGAGAACCCAGATTTGGGTTTCTTGTTCTCTTCTTTGTCTTTACGTTGGCTTCAATTTTTGTCAGCGCCGAATCACAGTGTAGCGAGACTTGTGATATGGCTCTTGCTTCGTACTATGTTCGGAATGGTACGAACCTCACATACATTTCGAAGGTTATGAATTCCCGGCTTGTTTCAACCCCAGATGATATCGTCAGCTACAACAAGGACAAAATACCCAATAAAGACAGCCTCTCAGCATCCATAAGAATCAACGTTCCATTCCCATGTGAGTGCATTAATGGTGAATTTTTAGGCCACATGTTTCAATATGATGTTCAGACAAGGGACACCTACGAGCAGGTTGCCGGAACAAACTATGCCAATTTGACCACTGTTGACTGGTTGCGGAAGTTCAATAGCTACCCACCGGACAATATTCCTGACACTGGAACCTTAAATGTTACGATTAACTGTTCCTGCGGGAATAGAGATGTCTCTAAGGATTATGGACTATTCATCACGTACCCACTTAGGCCTGGGGATGACTTGGGGTCAGTGGCAAGCGACGTGGGTCTTGACGCCGGACTACTGCAGAGGTACAACCCGTCTGTGAATTTCAACCAAGGAAGTGGTCTGGTTTTTATTCCGGGCAAAGATCAAAATGGTACCTACGCGCCACTTCAATCAAGAAAGGCTGGAGGTCTTTCTACTGGGGCTATAGTTGGAATATCCATTGGAGTAGTAGCAGGTCTTCTGCTATTGGCATTTGGTATATATATTGGTTATTTCAAAAAGAAAAAGACAGGCAAGGTTAAATTACTTCCCCAAGAATCCCAAGGTCTCTATTCTCATGACAGGAGGGATACAACCTCCGGTAATGATGAAAATGGAACTTCAGGAGTTGGCGGTCCTGTATCCCCTATTGCTGGCATTGCTAACATTACAGTGGACAAATCTGTGGAGTTTTCATATGAAGAACTTGCTACTGCCACAAACACCTTCAATATGGCAAACATGATTGGTCAAGGTGGTTTTGGTGCTGTCTACTATGCAGAGCTGAGAGGAGAGAAAGCAGCAATCAAGAAGATGGATATGCAGGCAACAAGAGAATTTCTGGCTGAGTTGAAAGTCCTGACAAATGTTCATCACCTTAATTTGGTGCGTTTGATCGGCTATTGTGTTGAGGAATCTCTTTTCCTTGTCTATGAGTACATTGAGAATGGAAACTTAAGTCAGCATCTCCGAAGTTCAGGAAGAGATCCACTCCCCTGGTCTACCAGGGTGCAAATTGCTCTGGATTCAGCAAGAGGTCTTGAATATATTCATGAGCATACAGTGCCAGTATATATCCATCGTGACATAAAGTCGGCTAATATATTAATAGACAAAAACTTCCGTGGCAAGGTTGCAGATTTTGGATTGGCAAAACTGACTGAAGTTGGCAGTGGGACACTTCCCACTGGTCGTCTTGTGGGTACATTTGGATATATGCCACCAGAATATGCTCAATATGGGGATGTTTCTCCTAAAGTAGATGTCTATGCTTTTGGAGTAGTTCTCTATGAACTTATCTCTGCTAAGGAAGCTATCATCAAGATAAATGAATCAATCACAGACTCGAAGGGCATCGTATCTCTGTTTGAGGGAGTTCTTAATCATCCAAATCCAACCGAAGATCTTCGCAAATTGGTGGACCCAAGACTTGGGAATGACTACCCTATGGATTCCGTTTTCAAGGTGGCTCAGCTTGCCAAAGCATGCACGCATGACAATCCCCAACTGCGTCCAACAATGAGATCTATCGTTGTTGCTCTTATGATACTTTCTTCCGCCACTGAGGATTGGGATGTTGGCTCCTTTTATGAAAATCCAGCTCTTATGAATCTCATGTCTGGAAGATAG	1887	0.4351	MGEPRFGFLVLFFVFTLASIFVSAESQCSETCDMALASYYVRNGTNLTYISKVMNSRLVSTPDDIVSYNKDKIPNKDSLSASIRINVPFPCECINGEFLGHMFQYDVQTRDTYEQVAGTNYANLTTVDWLRKFNSYPPDNIPDTGTLNVTINCSCGNRDVSKDYGLFITYPLRPGDDLGSVASDVGLDAGLLQRYNPSVNFNQGSGLVFIPGKDQNGTYAPLQSRKAGGLSTGAIVGISIGVVAGLLLLAFGIYIGYFKKKKTGKVKLLPQESQGLYSHDRRDTTSGNDENGTSGVGGPVSPIAGIANITVDKSVEFSYEELATATNTFNMANMIGQGGFGAVYYAELRGEKAAIKKMDMQATREFLAELKVLTNVHHLNLVRLIGYCVEESLFLVYEYIENGNLSQHLRSSGRDPLPWSTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLAKLTEVGSGTLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIIKINESITDSKGIVSLFEGVLNHPNPTEDLRKLVDPRLGNDYPMDSVFKVAQLAKACTHDNPQLRPTMRSIVVALMILSSATEDWDVGSFYENPALMNLMSGR	628

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju07g0071	628	Gene3D	Transferase(Phosphotransferase) domain 1	400	613	-	-
	Alju07g0071	628	SUPERFAMILY	Protein kinase-like (PK-like)	312	601	IPR011009	-
	Alju07g0071	628	Gene3D	Phosphorylase Kinase; domain 1	304	399	-	-
	Alju07g0071	628	FunFam	LysM receptor kinase 2	308	399	-	-
	Alju07g0071	628	ProSiteProfiles	Protein kinase domain profile.	329	603	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju07g0071	628	ProSitePatterns	Protein kinases ATP-binding region signature.	335	357	IPR017441	GO:0005524
	Alju07g0071	628	PANTHER	CHITIN ELICITOR RECEPTOR KINASE 1-RELATED	11	614	IPR044812	GO:0019199\|GO:0045087
	Alju07g0071	628	MobiDBLite	consensus disorder prediction	274	299	-	-
	Alju07g0071	628	FunFam	PTI1-like tyrosine-protein kinase 3	400	614	-	-
	Alju07g0071	628	Pfam	Protein tyrosine and serine/threonine kinase	331	599	IPR001245	GO:0004672\|GO:0006468
	Alju07g0071	628	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	444	456	IPR008271	GO:0004672\|GO:0006468
	Alju07g0071	628	SMART	serkin_6	329	602	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju07g0071	Alju-ChrAlju07	770920	778006	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju07g0071	14	628	Receptor kinase-like Gene Family	AT3G21630	59.164	0.0	725

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LysM	Alju07g0071		PK_Tyr_Ser-Thr	9.5e-47	CL0016