Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0058 ATGGATTTACAAAAAAATCTGCAGTCGAGGTCTTCTTCTTCTTCTAGTGCCTACATTCCGCCACACCGAACCCAACTTCACCCTCGCATGATCTCAGTCTATTCTTCTCCCCCGAATCTGAACCTTCAACCAAATTCTAACAGGCAATCAACCAAATGGCTCATCCTTGTCTCCTCTCTCTGCACCTTTCCCTTCTTGTTCTACCTCTTCACCACCGCTCAAAAAATCCACGCTTCTTCCAAGTTCACTGAGCCCAAGTCTACATTCTTCGGCCTTGTTATCAATGCGGGTTCCTCATGTTCTAAAATCAACGTCTTCGAGTTTCTCGGGGAGGGCCGGATTCCCTTCCTTGACGAGGCTGGGTCGAGCTCCATGAAGATTGGGGTTGGATTGATGGGTTTCGCAGGGGACCCCGATGGGGCCGGAGCCTCCATTGTGCAGTTAGTCGAGTTTGCTAAGCAGCAAGTCCCGAAGAAGGAGTGGGGAAGGACTAAGGTTCAGTTGATCGCCACGCAGGAGTTGGAGAACTTGAATGTTGAGGTCAGGCAGAAGATTTTGGACTCTTGTAGACAGTTTCTGAGGTCATCTGGGTTTTTGTTCAAGGATGAATGGGCACGTGTAGTTCAAGATGAAGAACAAGGTGTCTCTTCTTGGGTTGCTGCAAATTATGCTCTTGGAAACTTGGGACGTGAGCCTCAAGAAACTGCTGGAATTGTTCAACTTGGTGGGAATTCCTTGCAGGTTACATTGGCGTTGGTAAACTCAAAGTCAGGACAGCCTTCCCAGACTATTAAATGGTCTGGAGTTACCTACAATCTCTATACTCAGAGTTGGCCCGAACTTGGTCAGGATGTAGCATTGAAATCGTTGGAGGAGATGCTGAATCACAGGGAATCAAAATTTTCTTCAAGATCTATCAGAAACAATATTGGTAATCCTTGCATTCCAAAAGGTTATTCCTGGGACTTTAAGTCAAGTTCTGTACATCGCCCAATTGTCCAAGCTGTTGGAAATTATTCTGCATGCAAATCTGAAACCGGGACATTTTTTAAGAGAAGAAAAGCTAGATGCCAACATCCACCATGTAAAGTTGCCTCATCTTTACTTGAGTTATCGGGCGTGCAAATTTCTTCCAGAGACTTCTTGTACACCTCTGAGTTTTTTGGGATGGTTCCTAGGGCTTCTTTGTCTGAACTGGAAGCAGCTGGCCAACATTACTGTGAAGATCATTGGGATGCCCTTAGAAGGCAACATAATGAAATTGATGATCTGGATCTATCAAAATATTGCTTCTCTTCTGCTTATATGGTTGCACTTCTGCATGATGTTTTTGGGGTATCTATGGAAGAGAAAAGGATTGGATTTGGAAATCGGAAGGGGACTTTTCACATTGACTGGACCCTTGGATCCTTCATGGTTGAAACAATGGCAGAACCCATTGAATTGGACCCTGTGGACACAGGGCTGATTGTTGGGAATGAATCAGTGACATACTTCTCAATGTTTGCATTTCTTTTTATAGTTGTACTGGCTGCATTCTTTGTACTTCAATGGAGAAAGCCAAAATTAAAGACTGTATATGACCTCGAGAAGGGACACTACATTGTTACTCGTGTACCTAACTCCACTAACATCGATATTTTAGAAACGGAAGCGGCAACCTTGAGCCCTAATTGTGTCTCCCATTTCTCCCTCGCGCTCACTTCTGAAGTTTCTAGCACTTCAACCTCCTCGTCTCTAACAATGGCAGCTATGATGCAACCCCAGATCATATTGCTGAAAGAAGGGACCGACACATCGCAAGGAAAGGCGCAGTTGGTGAGCAACATCAATGCGTGTACTGCTGTGGCAGATTTGGTGCGAACGACGCTCGGCCCGCGTGGGATGGACAAACTGATCCACGATGATAAGGGAAATGTCACCATTTCCAACGATGGTGCCACTATCATGAAGCTCTTGGACATCATTCATCCCGCTGCTAAGATCCTTGTTGATATCGCTAAGTCTCAGGACTCTGAGGTTGGTGATGGAACCACCACAGTGGTATTGCTCGCGGCTGAGTTTTTAAGGGAGGCTAAGCCTTTTATTGAAGATGGTGTGCACTCTCAGAATTTGATACGGAGCTTTAGGACTGCTTGCTCCTTGGCAATTGAGAAGATAAAAGAACTAGCTGTCAGTATAGAGGGAAAAAGTCTGGAAGAGAAGAAAAGCTTGCTTGCAAAATGTGCTTCTACAACCCTTTCTTCTAAGCTCATTGGCGGAGAGAAGGAATTCTTTGCATCAATGGTTGTCGATGCTGTGGTTGCAATTGGAAATGAAGACAGGATGAACATGATTGGAATCAAGAAGGTTCCAGGTGGTAATATGAGGGACTCCTTTCTAGTGAATGGTGTTGCCTTCAAAAAGACATTTTCATATGCTGGCTTTGAACAACAACCAAAGAAGTTTCTTAGTCCTAAGATCCTCTTACTAAATGTTGAGTTAGAGCTGAAATCTGAGAAAGAGAATGCTGAAATAAGATTATCAGATCCAGCGCAATATCAATCAATTGTTGATGCAGAATGGAATATCATATATGACAAGTTAGACAAATGTGTCAAGAGTGGAGCCAAAGTTGTTCTTTCACGATTGGCTATCGGTGATCTCGCTACACAGTATTTTGCAGATAGAGATATATTTTGTGCTGGTCGTGTGGCTGAAGAAGATCTTCAACGGGTTGCTGCTGCAACTGGTGGAACTGTACAGACATCTGTCAATAATATAATTGATGAGGTCCTTGGGACTTGTGAGATTTTTGAGGAAAAGCAAGTTGGAAATGAGAGGTTCAATATATTTAATGGTTGTCCATCTGGCGTGACAGCTACAATAGTTCTTCGTGGTGGAGCTGATCAGTTCATTGAGGAAGCTGAGCGAAGTCTTCATGATGCAATCATGATTGTTAGGAGGGCTTTAAAGAATTCTAACGTAGTTGCTGGTGGTGGTGCTATAGACATGGAAATCAGCAGGTATTTGAGGCAGCATGCTCGTACAATAGCTGGGAAGGCTCAGCTTTTTATCAACTCTTATGCTAAAGCTCTTGAGGTCATCCCTCGGCAATTATGTGACAATGCTGGATTTGATGCAACTGATGTGCTGAACAAATTAAGACAGAAACATGCGCTTCCTTCTGGTGAGGGGGCACCATATGGTGTGGACATCACCACTGGTGGAATTGCCGACTCGTTTGCAAACTTTGTGTGGGAGCCTGCGGTTGTGAAGATCAATGCTATAAATGCTGCTACGGAAGCAGCTTGCCTTATCTTGAGTGTGGACGAAACAGTTAAAAATCCTAAGTCTGAGAGTGCACAAGGAGAGGCTGCTGCCAGTGCCATGGGGGGCAGAGGCCGTGGAGGTGGCTTCCCTGGTCGAGGGGGACGAGGTATGAGAAGGCGATGA 3435 0.4472 MDLQKNLQSRSSSSSSAYIPPHRTQLHPRMISVYSSPPNLNLQPNSNRQSTKWLILVSSLCTFPFLFYLFTTAQKIHASSKFTEPKSTFFGLVINAGSSCSKINVFEFLGEGRIPFLDEAGSSSMKIGVGLMGFAGDPDGAGASIVQLVEFAKQQVPKKEWGRTKVQLIATQELENLNVEVRQKILDSCRQFLRSSGFLFKDEWARVVQDEEQGVSSWVAANYALGNLGREPQETAGIVQLGGNSLQVTLALVNSKSGQPSQTIKWSGVTYNLYTQSWPELGQDVALKSLEEMLNHRESKFSSRSIRNNIGNPCIPKGYSWDFKSSSVHRPIVQAVGNYSACKSETGTFFKRRKARCQHPPCKVASSLLELSGVQISSRDFLYTSEFFGMVPRASLSELEAAGQHYCEDHWDALRRQHNEIDDLDLSKYCFSSAYMVALLHDVFGVSMEEKRIGFGNRKGTFHIDWTLGSFMVETMAEPIELDPVDTGLIVGNESVTYFSMFAFLFIVVLAAFFVLQWRKPKLKTVYDLEKGHYIVTRVPNSTNIDILETEAATLSPNCVSHFSLALTSEVSSTSTSSSLTMAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADLVRTTLGPRGMDKLIHDDKGNVTISNDGATIMKLLDIIHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHSQNLIRSFRTACSLAIEKIKELAVSIEGKSLEEKKSLLAKCASTTLSSKLIGGEKEFFASMVVDAVVAIGNEDRMNMIGIKKVPGGNMRDSFLVNGVAFKKTFSYAGFEQQPKKFLSPKILLLNVELELKSEKENAEIRLSDPAQYQSIVDAEWNIIYDKLDKCVKSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLQRVAAATGGTVQTSVNNIIDEVLGTCEIFEEKQVGNERFNIFNGCPSGVTATIVLRGGADQFIEEAERSLHDAIMIVRRALKNSNVVAGGGAIDMEISRYLRQHARTIAGKAQLFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPSGEGAPYGVDITTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKSESAQGEAAASAMGGRGRGGGFPGRGGRGMRRR 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0058 1144 CDD TCP1_eta 589 1112 IPR012720 GO:0005524|GO:0006457|GO:0016887|GO:0051082
Alju07g0058 1144 FunFam T-complex protein 1 subunit eta 796 951 - -
Alju07g0058 1144 Gene3D - 90 470 - -
Alju07g0058 1144 ProSitePatterns Chaperonins TCP-1 signature 3. 670 678 IPR002194 GO:0005524|GO:0006457|GO:0016887|GO:0051082
Alju07g0058 1144 FunFam T-complex protein 1 subunit eta 988 1108 - -
Alju07g0058 1144 Gene3D GroEL 796 951 IPR027409 -
Alju07g0058 1144 PANTHER CHAPERONIN 600 1110 IPR017998 GO:0140662
Alju07g0058 1144 NCBIfam thermosome subunit beta 590 1107 - -
Alju07g0058 1144 SUPERFAMILY GroEL equatorial domain-like 598 1109 IPR027413 -
Alju07g0058 1144 PRINTS Tailless complex polypeptide 1 (chaperone) signature 640 658 IPR017998 GO:0140662
Alju07g0058 1144 PRINTS Tailless complex polypeptide 1 (chaperone) signature 955 977 IPR017998 GO:0140662
Alju07g0058 1144 PRINTS Tailless complex polypeptide 1 (chaperone) signature 989 1001 IPR017998 GO:0140662
Alju07g0058 1144 PRINTS Tailless complex polypeptide 1 (chaperone) signature 670 689 IPR017998 GO:0140662
Alju07g0058 1144 PRINTS Tailless complex polypeptide 1 (chaperone) signature 618 634 IPR017998 GO:0140662
Alju07g0058 1144 FunFam T-complex protein 1 subunit eta 952 987 - -
Alju07g0058 1144 Pfam GDA1/CD39 (nucleoside phosphatase) family 84 475 IPR000407 GO:0016787
Alju07g0058 1144 Gene3D - 726 987 IPR027410 -
Alju07g0058 1144 Gene3D Exopolyphosphatase. Domain 2 209 460 - -
Alju07g0058 1144 Pfam TCP-1/cpn60 chaperonin family 616 1109 IPR002423 GO:0005524
Alju07g0058 1144 NCBIfam thermosome subunit alpha 590 1107 - -
Alju07g0058 1144 ProSitePatterns Chaperonins TCP-1 signature 2. 642 658 IPR002194 GO:0005524|GO:0006457|GO:0016887|GO:0051082
Alju07g0058 1144 Gene3D - 613 1107 IPR027413 -
Alju07g0058 1144 SUPERFAMILY GroEL apical domain-like 791 960 IPR027409 -
Alju07g0058 1144 ProSitePatterns Chaperonins TCP-1 signature 1. 621 633 IPR002194 GO:0005524|GO:0006457|GO:0016887|GO:0051082
Alju07g0058 1144 FunFam T-complex protein 1 subunit eta 613 725 - -
Alju07g0058 1144 MobiDBLite consensus disorder prediction 1 21 - -
Alju07g0058 1144 SUPERFAMILY GroEL-intermediate domain like 736 987 IPR027410 -
Alju07g0058 1144 MobiDBLite consensus disorder prediction 1110 1144 - -
Alju07g0058 1144 NCBIfam T-complex protein 1 subunit eta 587 1112 IPR012720 GO:0005524|GO:0006457|GO:0016887|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0058 Alju-ChrAlju07 577471 600190 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0058 36 475 Nodulin-like Gene Family AT4G19180 21.458 2.88e-22 101