Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0053 ATGGAGGATGATTTTGATACCCAGAAAATCAGAAACATATGTATTTTGGCACATGTCGATCATGGAAAGACTACATTGGCTGATCATTTGATTGCTGCTTCAGGGGGTGGCCTACTTCACCCGAAGTTGGCTGGACGAATTAGGTTCATGGACTATCTTGATGAGGAGCAAAGGAGAGCCATCACCATGAAGAGCTCTTCCATTGGTCTTCATTATAAAGACTACTCTATTAACCTCATAGATTCCCCTGGTCATATGGACTTTTGTAGCGAGGTGTCCACAGCTGCTAGATTAAGTGATGGTGCATTAATTTTGGTTGATACTGTTGAAGGTGTGCATATTCAAACCCATGCTGTGTTGCGGCAGTGTTGGATTGAGAAGCTATCTCCTTGCTTGGTTCTTAATAAAATTGATAGGTTGATTAGTGAATTGAAGTTGAGTCCCATGGAAGCCTATATTCGGTTATTACGTATTGTGCATGAGGTCAATGGGATAGTTAGTACATATAAGTCTGAGAAGTATTTGTCAGATGTAGATTCCATACTTGCAGGACCTTCAGGCGATATGACTGTTGATGAAAACATTGACCTCATAGAGGATGATGAAGAAGATATGTTTCTACCGCAGAAAGGGAATGTGGCATTTGTGTGTGCACTAGATGGTTGGGGATTCGGAATTCATAAATTTGCTGAATTTTATGCTTCAAAATTGGGGGCTAGTGCTGCTGCATTGCAAAAAGCCCTATGGGGTCCTCGTTATTACAATTCAAAAACTAAAATGATTGTTGGTAAGAAAGGTATAGGTGGAGGAAGTAAGGCAAGGCCAATGTTTGTCCAATTTGTTTTAGAACCACTATGGCAGGTATACCAAGGTGCTCTAGAGGATGATGGTGACAAAGGAATGCTTGAGAAAGTCATTAAGTCATTTAGTTTGTCTATTCCATCTCGTGAATTGCAAAATAAAGACCCTAAGCTTGTGCTTCAAGCTGTTATGAGTCGGTGGCTTCCCCTTTCTGATACAATCTTATCAATGGTGGTGAAGTGTATGCCAGATCCAGCATCTGCACAATCATTTCGTATCTCACGTCTTCTTCCAAAAAGAGAGGTTCTTGATTATGGGGTTGATCAGAATGTGCTTGCAGAGGCAGAGCTTGTTAGAAAATCAGTTGAGTCATGTGATTTGAAACGTGAAGCTCCATGTGTTGCTTTTGTGTCAAAAATGTTTGCCGTGCCAATTAAAATGCTTCCTGATAGGGGTTCACATGGGGAGGTCATGAACTATTCTGGTGATGGAGAGGGTGAATCAGATGAGTGTTTCTTGGCATTTGCTAGAATATTTAGTGGAACTTTTTCTGCCAGACAAAAAGTTTTTGTGCTTTCAGCTTTGTATGATCCACTAAAAGGAGAACAAATGCAAAAGCATGTTCAAGAGGCTGAATTACAATCTTTGTATCTAATGATGGGCCAAGGCTTGAAGGTAGTGACATCTGCTAAAGCAGGAAACATTTTTGCAATCCGAGGCCTTGGCCAACATATCCTTAAAAGTGCTACACTCTCATCTACCAAGAATTGTTGGCCCTTCTCTAGTATGTCTTTTCAGGTTGCCCCAACATTAAGAGTTGCTATTGAGCCATCTGACCCTGCAGATATGAGTGCACTATTGAAAGGCTTGAGGCTTCTAAATAGAGCGGACCCATTTGTTGAGGTCACTGTATCTGCAAGAGGGGAACATGTCTTAGCTGCAGCAGGAGAAGTTCATCTTGAAAGATGTGTAAAAGATTTAAAGGAAAGATTTGCTAAGGTAAGCTTAGAAGTCTCTCCACCTCTTGTGTTTTACAAAGAAACCATTGAAGGAGAAGTGTCTAGCATGCTTGAAATTTTGAAAGCTCTTAGTAAGAACACAGATTATGTTGAAAAAACAACCCCAAATGGTAGATGTGTTGTCCATGTGCATGTGATGAAACTTCCATCTTCTTTAACAAAGGTACTTGATGATAGTTCTGATGTATTGGGAGATGCCATTGGAATAAAGTCTGGGCATACTGTTAAAAATTTGGATTCTCAGAGATCAGGTATCCTTGAAAATGATAGTCCAACTGAGGTGCTAAAAAAACACATAATGGATGCATTGGAAAGTGAGATTTTGAGCAAGAATGAGAATGACATGGATTATGTTAACAAATGTAAGTCAAAGTGGGTAAAACTTTTGAGAAGGATATGGGCACTTGGACCTAGGCAAATTGGTCCCAACATTCTCTTTACTCCTGATGTCAAAGTTGAGAGTAGTGATGGCTCTATTCTTATACGTGGTGATTGTCATGCATCTGAAAGACTGGGTTTTGTTGATGATTCTAGTACTTCTAATACACAGGCTGATACACCCTTAAATGTGAATGAAGCATTCAACATGGAGGCTAAGCGTCTTGAGAGTAGTGTCATATCTGGGTTCCAATTGGCCACTGCAGCCGGACCCTTGTGTGATGAGCCTATGTGGGGTTTGGCATTTGTCATTGAGGCATACATTTATCCCTATTTCGGGCAAAATGATGAATCTGAAACACACCAACAATCTGAGCAATTTGCAGGACAAATAATCACAACCGTCAAAGATGCTTGTAGAGCAGCTGTGCTTCAGAATAGGCCACGGCTTGTGGAAGCCATGTACTTCTGTGAGTTGAATACTCCTACTGAATATTTGGGTCCCATGTATGCTGTACTTGCCCGAAGGCGGGCCCGAATTTTAAAGGAAGAGATGCAGGAAGGTTCCCCTTTCTTCACTGTGCATGCATATGTGCCTGTTTCTGAAAGTTTTGGTTTTGCTGATGAGCTTAGGAGGTGGACTTCTGGAGCTGCTAGTGTACTTCTTGTACTTAGTCACTGGGAAGCACTTTCTGAGGATCCTTTCTTTGTACCTAAAACTGAAGAGGAAATTGAAGAGTTTGGAGATGGCTCTAGTGTGCTTCCTAACACAGCAAGAAAGTTAATTAATGCAGTCAGACGTCGTAAGGGCCTTCATGTGGAGGAAAAAATAGTACAACATGGAACTAAGCAGAGGACACTAGCTCGTAAAGTCTGA 3075 0.4111 MEDDFDTQKIRNICILAHVDHGKTTLADHLIAASGGGLLHPKLAGRIRFMDYLDEEQRRAITMKSSSIGLHYKDYSINLIDSPGHMDFCSEVSTAARLSDGALILVDTVEGVHIQTHAVLRQCWIEKLSPCLVLNKIDRLISELKLSPMEAYIRLLRIVHEVNGIVSTYKSEKYLSDVDSILAGPSGDMTVDENIDLIEDDEEDMFLPQKGNVAFVCALDGWGFGIHKFAEFYASKLGASAAALQKALWGPRYYNSKTKMIVGKKGIGGGSKARPMFVQFVLEPLWQVYQGALEDDGDKGMLEKVIKSFSLSIPSRELQNKDPKLVLQAVMSRWLPLSDTILSMVVKCMPDPASAQSFRISRLLPKREVLDYGVDQNVLAEAELVRKSVESCDLKREAPCVAFVSKMFAVPIKMLPDRGSHGEVMNYSGDGEGESDECFLAFARIFSGTFSARQKVFVLSALYDPLKGEQMQKHVQEAELQSLYLMMGQGLKVVTSAKAGNIFAIRGLGQHILKSATLSSTKNCWPFSSMSFQVAPTLRVAIEPSDPADMSALLKGLRLLNRADPFVEVTVSARGEHVLAAAGEVHLERCVKDLKERFAKVSLEVSPPLVFYKETIEGEVSSMLEILKALSKNTDYVEKTTPNGRCVVHVHVMKLPSSLTKVLDDSSDVLGDAIGIKSGHTVKNLDSQRSGILENDSPTEVLKKHIMDALESEILSKNENDMDYVNKCKSKWVKLLRRIWALGPRQIGPNILFTPDVKVESSDGSILIRGDCHASERLGFVDDSSTSNTQADTPLNVNEAFNMEAKRLESSVISGFQLATAAGPLCDEPMWGLAFVIEAYIYPYFGQNDESETHQQSEQFAGQIITTVKDACRAAVLQNRPRLVEAMYFCELNTPTEYLGPMYAVLARRRARILKEEMQEGSPFFTVHAYVPVSESFGFADELRRWTSGAASVLLVLSHWEALSEDPFFVPKTEEEIEEFGDGSSVLPNTARKLINAVRRRKGLHVEEKIVQHGTKQRTLARKV 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0053 1024 CDD EF2 11 234 - -
Alju07g0053 1024 CDD eEF2_snRNP_like_C 885 963 - -
Alju07g0053 1024 CDD aeEF2_snRNP_like_IV 607 889 - -
Alju07g0053 1024 Gene3D Yeast translation eEF2 (G' domain) 226 335 - -
Alju07g0053 1024 PRINTS GTP-binding elongation factor signature 12 25 IPR000795 GO:0003924|GO:0005525
Alju07g0053 1024 PRINTS GTP-binding elongation factor signature 130 139 IPR000795 GO:0003924|GO:0005525
Alju07g0053 1024 PRINTS GTP-binding elongation factor signature 78 88 IPR000795 GO:0003924|GO:0005525
Alju07g0053 1024 PRINTS GTP-binding elongation factor signature 58 66 IPR000795 GO:0003924|GO:0005525
Alju07g0053 1024 PRINTS GTP-binding elongation factor signature 94 105 IPR000795 GO:0003924|GO:0005525
Alju07g0053 1024 Gene3D - 2 203 IPR027417 -
Alju07g0053 1024 FunFam Translation elongation factor 2 535 611 - -
Alju07g0053 1024 SUPERFAMILY EF-G C-terminal domain-like 534 608 IPR035647 -
Alju07g0053 1024 Pfam Elongation factor Tu GTP binding domain 9 349 IPR000795 GO:0003924|GO:0005525
Alju07g0053 1024 FunFam Elongation factor like GTPase 1 226 335 - -
Alju07g0053 1024 Gene3D Elongation Factor G (Translational Gtpase), domain 3 535 611 - -
Alju07g0053 1024 FunFam Elongation factor 2-like protein 1 214 - -
Alju07g0053 1024 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 7 1023 - -
Alju07g0053 1024 Pfam Elongation factor Tu domain 2 440 518 IPR004161 GO:0005525
Alju07g0053 1024 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 350 IPR027417 -
Alju07g0053 1024 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 8 242 IPR000795 GO:0003924|GO:0005525
Alju07g0053 1024 CDD EF2_II 399 521 - -
Alju07g0053 1024 SMART EFG_C_a 882 971 IPR000640 -
Alju07g0053 1024 Gene3D - 881 1015 - -
Alju07g0053 1024 CDD EF2_snRNP_III 536 607 - -
Alju07g0053 1024 SUPERFAMILY Ribosomal protein S5 domain 2-like 610 884 IPR020568 -
Alju07g0053 1024 NCBIfam small GTP-binding protein domain 9 140 IPR005225 GO:0005525
Alju07g0053 1024 FunFam Elongation factor like GTPase 1 881 1016 - -
Alju07g0053 1024 Pfam Elongation Factor G, domain III 536 603 IPR041095 -
Alju07g0053 1024 Gene3D Translation factors 352 533 - -
Alju07g0053 1024 Pfam Elongation factor G C-terminus 883 967 IPR000640 -
Alju07g0053 1024 SUPERFAMILY EF-G C-terminal domain-like 885 983 IPR035647 -
Alju07g0053 1024 SUPERFAMILY Translation proteins 391 530 IPR009000 -
Alju07g0053 1024 Gene3D - 631 879 IPR014721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0053 Alju-ChrAlju07 557643 560717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0053 3 1024 Eukaryotic Initiation Factors Gene Family AT3G22980 72.347 0.0 1526