Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0049 ATGGATGTTCAAGTAATAAATGTGGAAGAAGGGACTGGTCATCGAGCTACTACCGATGATGGGGATGCAGAACCTAGTGAAGGTGAAGTTAATAACGCTGAAAACTCAGGACCTCATGTTGAGGATGGAATTCCTGAGCCATTTGTTGGCATGGAGTTTGATTCTGAAGATGCTGTGAGGACGTTCTACAATGAGTATGCCAAACGTGTCGGTTTCACCACTAAAGTTGGCCAGCATGGCCGTTCTAAAGTTGACGGGGCAATCATGTATCGGGAGTATGTCTGCGGCAAGGAAGGTTTAAAAAGAAGGCTAGGTGACAGCTGTGATGCAATGATTAAAGTAGAGTTAAAAGGTCAAAATAAATGGGTCATAACAAAGTTTGTGAAGGATCATAGCCATTCCATGGTGAATCCTGGTAAGGTGCATCACCTTCGGCCACGTAAGCATTTTTCTAGTGTTGGAAAGACCATGCCTGAAACTTACCAAGGGGTGGGACTTGTCCCAAGTGGTGTCATGTATGTATCCATGGATGGGAATTGTGCTGCTAATGAGAATATTCGTGAAGCTAAGAACACTCCTCCTCTTGAACCAAGTCACGCAGTGAGAAATTCTACAATGATGAATAATACTGGTAGGCCTCCTATTCGAAAGAGGACATTAGGGAGAGATGCTCAGAACCTACTGGAATATTTTAAGAAAATGCAGGCTGAGAATCCTGGTTTCTTCTATGCCATACAACTTGATGAAGAAAATCGTATGTCGAATGTATTTTGGGCCGATGCAAGATCACGGACGGCATACAGTCATTTCGGTGATGCAGTGACCCTGGACACAACATACAAAGTGAATCAATACCGAGTTCCTTTTGTTCCATTTACTGGGGTGAACCATCATGGTCAAATGATTTTGTTTGGTTGTGCACTTCTTTTGGACGATTCTGAGGCTTCTTTCTTGTGGCTCTTTAAGACTTTTTTGACAGCAATGAATGACCGCCAACCTGTTTCTATGATTGCAGATCAAAACAAAGCCACACAGTCAGCAGTGTCTCAAGTTTTTCCCCAAACGCGCCACTGTATAAGTAAGTGGCATGTCTTGAGAGAAGGCCAAGAAAAGTTGGCTCATGTTTGTCATGCTCATCCAAACTTTCAGGTTGAACTTTATAATTGTATTAACCTAACGGAGACCATTGAGGAATTTGAGTCATCTTGGAGTTTCATCCTTGATAAATATGAGCTCAGAAGAAATGATTGGCTTCAGTCATTGTATGATGCTCGTGCTAAGTGGGTTCCAGCATATTTTCATGATTCATTTTTCGCTGCAATATCTCCTAATAGAGGATTTGACAGTTCTTTTTTTGACGGTTATGTCAACCAGCAGACAACATTACCAATGTTCTTTAGGGAGTATGAAAGGGCTTTAGAGAACTGGTTTGAGAAGGAAATAGAAGCGGATTTTGAAACTATCTGCACCACACCGGTTTTGAAGACACCTTCACCCATGGAAAAACAGGCTGCTAGTCTTTATACAAGGAAAATATTTTCTCTGTTTCAAGAAGAGCTAGTTGAAACATTTGTTTATACTGCCAATAGAATTGAAGGTGATGAGGTGAATAGCACGTTCAGAGTTGCAAAATTTGAAGATGATCAAAAGGCATATGTTGTGACATTAAACCATTCGGAGTTGAGAGCTAACTGTAGTTGTCAAATGTTTGAGTATTCAGGCATTCTTTGCAAGCATGTCTTAACCGTTTTCACTGTAACCAATGTACTTACCTTGCCACCCCATTACATCTTAAGACGGTGGACAAGAAATGCAAAAATTGGTGTTGGATCAGATGAACATGCTGGTGAATTACATGGGCAGGAGTCTCTAACATCAAGATATAGCAATCTATGTAGGGAAGCAATCAGATATGCTGAGGAAGGGGCAGTAGCTGTGGAAACATATAATGCTGCTTTCAATGCCCTTAAAGAAGGTGGGAAGAAGATTGCAGCTGTGAAGAAAAGTGTTTCCAAAGTTGCTCCTCCTAGCAATCAGACTGGTGGGACTGCTTATGATGAGAAAAAATCTTCTACGTCAACTTCAGATACAACCCCTCTTCTATGGCCACAGCATGATGAAATAATGAGGAGGTTTAATCTTAATGATGCTGGTGCTCCTGTTCAATCGGTTGCTGATCTAAATTTGCCACGAATGGCTCCTGTCTCCCTTCAGCGAGATGATGGTCCATCTGACAGCATGGTATGTAGAAAGGTGGTTCTCCCCCATCTGAAATCAATGACTTGGGTAATGGAGAACAAAAATTCAACTCCTGGGAATAGAGTTGCTGTTATCAATTTGAAGTTGCAAGATTACAGCAGGACTCCATCTGCAGAATCTGAGGTTAAGTTTCAGCTCTCAAGAGTTTCTTTGGAACCGATGTTGAAGTCTATGGCCTACATTAGTGAGCAGCTCTCAACACCAGTTAATAAGGTTGCTGTAATAAATCTCAAGCTTCAAGATACTGAGACAACTTCTGGGGAGTCTGAAGTAAAGTTTCAGGTGTCCAAGGATACATTGGGTGCCATGTTACGATCAATGGCTTATATTCGTGAGCAACTTTCACATGCTGGAGACACGCAGTCAGAGCCTGTATGGAAAAGGCATCGAAAATAA 2655 0.4169 MDVQVINVEEGTGHRATTDDGDAEPSEGEVNNAENSGPHVEDGIPEPFVGMEFDSEDAVRTFYNEYAKRVGFTTKVGQHGRSKVDGAIMYREYVCGKEGLKRRLGDSCDAMIKVELKGQNKWVITKFVKDHSHSMVNPGKVHHLRPRKHFSSVGKTMPETYQGVGLVPSGVMYVSMDGNCAANENIREAKNTPPLEPSHAVRNSTMMNNTGRPPIRKRTLGRDAQNLLEYFKKMQAENPGFFYAIQLDEENRMSNVFWADARSRTAYSHFGDAVTLDTTYKVNQYRVPFVPFTGVNHHGQMILFGCALLLDDSEASFLWLFKTFLTAMNDRQPVSMIADQNKATQSAVSQVFPQTRHCISKWHVLREGQEKLAHVCHAHPNFQVELYNCINLTETIEEFESSWSFILDKYELRRNDWLQSLYDARAKWVPAYFHDSFFAAISPNRGFDSSFFDGYVNQQTTLPMFFREYERALENWFEKEIEADFETICTTPVLKTPSPMEKQAASLYTRKIFSLFQEELVETFVYTANRIEGDEVNSTFRVAKFEDDQKAYVVTLNHSELRANCSCQMFEYSGILCKHVLTVFTVTNVLTLPPHYILRRWTRNAKIGVGSDEHAGELHGQESLTSRYSNLCREAIRYAEEGAVAVETYNAAFNALKEGGKKIAAVKKSVSKVAPPSNQTGGTAYDEKKSSTSTSDTTPLLWPQHDEIMRRFNLNDAGAPVQSVADLNLPRMAPVSLQRDDGPSDSMVCRKVVLPHLKSMTWVMENKNSTPGNRVAVINLKLQDYSRTPSAESEVKFQLSRVSLEPMLKSMAYISEQLSTPVNKVAVINLKLQDTETTSGESEVKFQVSKDTLGAMLRSMAYIREQLSHAGDTQSEPVWKRHRK 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0049 884 Pfam FAR1 DNA-binding domain 61 136 IPR004330 -
Alju07g0049 884 SMART 26again6 563 590 IPR006564 GO:0008270
Alju07g0049 884 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 32 664 IPR031052 GO:0006355
Alju07g0049 884 MobiDBLite consensus disorder prediction 673 700 - -
Alju07g0049 884 ProSiteProfiles Zinc finger SWIM-type profile. 552 588 IPR007527 GO:0008270
Alju07g0049 884 Pfam MULE transposase domain 274 365 IPR018289 -
Alju07g0049 884 Pfam SWIM zinc finger 552 586 IPR007527 GO:0008270
Alju07g0049 884 MobiDBLite consensus disorder prediction 190 217 - -
Alju07g0049 884 MobiDBLite consensus disorder prediction 1 41 - -
Alju07g0049 884 MobiDBLite consensus disorder prediction 197 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0049 Alju-ChrAlju07 536306 540905 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Alju07g0049 MULE 6.5e-24 CL0219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g0049 07 536306 540905 Alju07g0049 07 536306 540905 ECH