Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0003 ATGAGTTGCTTTCCGTGTTGTGCATCAAAAGAAAGGATCAAAAGGAAGGCATTGCAGAAGAGTAGCAAGGAGTGCCATGCTTCAAAATCTATAGCCTCGTTTGCCAACATTTCTTTTAAAAGTGATGCCAGCAGGGAAAGGTACATAACGGAAGAAATTAAGAAGATTGGAAATGGAAATATTACTGTTAAAATCTTCAGCTATCGAGAGCTATGCATTGCAACTCAGAATTTTCACCAGGACAACCTAATTGGTGAAGGAGGCTTCGGCAGGGTATACAAAGGATTTCTCGAAAGCATGAATCAAGTTGTTGCGGTGAAGCAACTTGACAGGAATGGGTTTCAGGGAAACAGGGAATTTCTTGTAGAGGTTTTGCTTTTGAGTCTCTTAAGCCACCCCAACCTCGTCAATTTGGTCGGTTATTGTGCTGATGGCGATCAAAGAATTTTGGTCTACGAGTATATGGTCAATGGTTCTTTAGAAGATCACCTCCTTGATTTAACTGAAGATAGAAAGCCTTTAGATTGGAGTACCAGAATGAAAATTGCTCAAGGTGCAGCGAAAGGACTTGAATATTTACATGAGGTAGCAAACCCACCAGTGATATACAGGGATTTCAAAGCATCAAACATACTATTGGATACAGATTTTAATCCAAAACTCTCTGATTTTGGTCTCGCAAAACTTGGTCCAACTGGAGAACACTCCCATGTGTCTACAAGAGTGATGGGAACTTATGGCTACTGCGCTCCTGAGTATGCACTCACAGGGCAGCTAAGTACTAAATCAGATATATATAGTTTTGGAGTTGTCTTCTTAGAAATGATTTCTGGAAGAAGAGTGGTTGATCATTCAAAGCCAACTGAAGAGCAAAATTTAGTTCTTTGGGCGCAACCACTATTGAAAGACAAAAGAAAGTTCACACTAATCGTTGATCCATTACTAGAAGATGATTACCCCGTAAAGGGTTTGTACCAAGCTCTAACAGTCGCAGCAATGTGTCTCCAAGAGGAAGCTCCTACTCGGCCTTTGATTAGCGACGTAGTCTCTGCTATGAAGTTTCTGGCTACGAAGATGATGAACGGGAATGATGAACATATTTTTGACTATTCTACTGAAGATGGAGATGATGGCAAGGACTATAGTATTGGAGGCTACGAATCTGATAGTATACTTGATTGTAAGAAATAA 1191 0.403 MSCFPCCASKERIKRKALQKSSKECHASKSIASFANISFKSDASRERYITEEIKKIGNGNITVKIFSYRELCIATQNFHQDNLIGEGGFGRVYKGFLESMNQVVAVKQLDRNGFQGNREFLVEVLLLSLLSHPNLVNLVGYCADGDQRILVYEYMVNGSLEDHLLDLTEDRKPLDWSTRMKIAQGAAKGLEYLHEVANPPVIYRDFKASNILLDTDFNPKLSDFGLAKLGPTGEHSHVSTRVMGTYGYCAPEYALTGQLSTKSDIYSFGVVFLEMISGRRVVDHSKPTEEQNLVLWAQPLLKDKRKFTLIVDPLLEDDYPVKGLYQALTVAAMCLQEEAPTRPLISDVVSAMKFLATKMMNGNDEHIFDYSTEDGDDGKDYSIGGYESDSILDCKK 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0003 396 Pfam Protein kinase domain 78 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g0003 396 Gene3D Phosphorylase Kinase; domain 1 38 154 - -
Alju07g0003 396 SUPERFAMILY Protein kinase-like (PK-like) 61 351 IPR011009 -
Alju07g0003 396 PANTHER OS07G0668900 PROTEIN 3 361 - -
Alju07g0003 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Alju07g0003 396 FunFam Serine/threonine-protein kinase PBS1 155 369 - -
Alju07g0003 396 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g0003 396 CDD STKc_IRAK 84 349 - -
Alju07g0003 396 FunFam Serine/threonine-protein kinase CDL1-like 49 154 - -
Alju07g0003 396 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Alju07g0003 396 Gene3D Transferase(Phosphotransferase) domain 1 155 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0003 Alju-ChrAlju07 20302 37800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0003 1 357 Glycoside Hydrolase AT3G07070 61.003 1.65e-159 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Alju07g0003 Pkinase 5e-47 CL0016