Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2820 ATGGGGTGCTCGTTTTCTGGGTTGAATGCATTGTATGACAACGTAAACGGGGGCAACGACGTGTGGATCAACGAGAACCGATTCCGCATCGTGAGGCAGCTCGGCGAAGGTGGCTTTTCCTACGTCTACTTGGTCAAGGAGGTGGTCACTGACTCCCCTCCCGCCTTATCTGGCGGTGGTCTCTCTAAGAAGCTCAAAGACTCTTCTCATGTCTCCGACGATGGAACTTGCGCTATGAAAAAGGTCCTCATTCAAAACAATGAACAGCTGGAGTTGGTGAAGGAGGAGATCCGTGTTTCATCACTCTTCAGTCATCCTAATTTGCTTCCACTTCTTGATCATGCAATCATTTCTGTTAAGCCAACCAAAGAAACATCTTGGAACCATGAAGCATACCTGTTGTTTCCTGTTCATTTGGATGGAACATTGCTCGACATTGCCCAAACTATGAAAGCCAAGAAAGAGTTATTTTCCACGTCAGATGTGCTTCACATATTTCAGCAGCTTGCTGCAGGACTCAAGCACATGCACAATATGGATCCTCCGCACGCACATAATGACGTCAAACCTGGTAATGTGGTAATAACACGCAGAAAGGGACAACCACCTCTTGCCATACTCATGGATTTTGGTAGTACTCGACCTGCCAGGCAGCAAATTCGCTCTCGATCTGAGGCACTGCAGTTGCAGGAATGGGCAGCTGAACATTGCTCTGCTCCTTTTCGAGCTCCTGAGCTATGGGATTGCCCTAGCCATGCTGACATAGATGAGAGGACTGATGTCTGGTCACTGGGATGCACACTGTATGCAATGATGTACGGGGTATCTCCGTTTGAATATGCACTTGGAGAAGCTGGTGGAAGCCTGCAACCGGCCATTGTAAATGCTCAAATCAAATGGCCGGCTGGACCTAAGTCTCCATATCCTGATACTCTTCATCAGTTTGTGACATGGATGCTTCAACCTCAGGCTGCTGTGCGGCCCCGAATGAACGATATTGTTATCCATGTTGAAAAATTGATCGCCAAGTTCTGTCATTGA 1041 0.4774 MGCSFSGLNALYDNVNGGNDVWINENRFRIVRQLGEGGFSYVYLVKEVVTDSPPALSGGGLSKKLKDSSHVSDDGTCAMKKVLIQNNEQLELVKEEIRVSSLFSHPNLLPLLDHAIISVKPTKETSWNHEAYLLFPVHLDGTLLDIAQTMKAKKELFSTSDVLHIFQQLAAGLKHMHNMDPPHAHNDVKPGNVVITRRKGQPPLAILMDFGSTRPARQQIRSRSEALQLQEWAAEHCSAPFRAPELWDCPSHADIDERTDVWSLGCTLYAMMYGVSPFEYALGEAGGSLQPAIVNAQIKWPAGPKSPYPDTLHQFVTWMLQPQAAVRPRMNDIVIHVEKLIAKFCH 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2820 346 SUPERFAMILY Protein kinase-like (PK-like) 20 336 IPR011009 -
Alju06g2820 346 Gene3D Transferase(Phosphotransferase) domain 1 139 344 - -
Alju06g2820 346 Gene3D Phosphorylase Kinase; domain 1 11 136 - -
Alju06g2820 346 CDD STKc_16 27 342 - -
Alju06g2820 346 ProSiteProfiles Protein kinase domain profile. 28 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2820 346 SMART serkin_6 28 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2820 346 Pfam Protein kinase domain 68 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2820 346 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 3 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2820 Alju-ChrAlju06 55112808 55120340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2820 33 299 EF-hand Containing Proteins AT4G04710 24.254 3.33e-10 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Alju06g2820 Pkinase 1.6e-28 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2820 06 55112808 55120340 Alju06g2820 06 55112808 55120340 ECH