Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2812 ATGGATGGGAACACAAGCTTAGAGCAACAGAATCTTCACCATCATTGTCCTGCTCAGAAACCCATTCTGAACTCAAGCTTACTCAACATGGAAACTGGGGAAGGCCATAAAGGTTCACAGGTCTTAGGTCATAGTCAAGGTTTACACTATATTCCATTTTACTACTCTCAGTTACACCTTCCCAACAACCCAGTTCTGTTTATAGACCATAAATCCTCTCCAAACACTTCATCTAACAGTAACAACAACAACAACATCAATGATTCTGGGGAAGGGAATGCTGTTGCTGATGAGAGAAAGAAGAAAAGAATGTTCTCCAACAGAGAATCTGCTCGCAGGTCGAGGATGAGGAAGAAACAGCAGATAGAAAACCTTCAGTATCAAGTGGATCATCTTCAGACCATGAACCATCAACTTTCCCAGAAGATCATTTACTTGTTGGAATGTAACCAGCAGATCCTCCAGCAGAACGGTCAGCTCAAAGAGAAAATTTCTACACTTCACATGACCCTCTCTGACTTGTTAGTTCCTCTGCCTCGTGATGACGAAGCCAATAATCAGATCCCCAATGCCCTCATTGCCGAGCCTTCTGCTCCACCAGTTGCTAGTTCCGAGGCATAG 621 0.4364 MDGNTSLEQQNLHHHCPAQKPILNSSLLNMETGEGHKGSQVLGHSQGLHYIPFYYSQLHLPNNPVLFIDHKSSPNTSSNSNNNNNINDSGEGNAVADERKKKRMFSNRESARRSRMRKKQQIENLQYQVDHLQTMNHQLSQKIIYLLECNQQILQQNGQLKEKISTLHMTLSDLLVPLPRDDEANNQIPNALIAEPSAPPVASSEA 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2812 206 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 102 117 IPR004827 GO:0003700|GO:0006355
Alju06g2812 206 MobiDBLite consensus disorder prediction 93 119 - -
Alju06g2812 206 Coils Coil 108 142 - -
Alju06g2812 206 FunFam BZIP transcription factor 97 148 - -
Alju06g2812 206 MobiDBLite consensus disorder prediction 69 119 - -
Alju06g2812 206 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 97 146 IPR004827 GO:0003700|GO:0006355
Alju06g2812 206 Gene3D - 97 152 - -
Alju06g2812 206 SUPERFAMILY Leucine zipper domain 99 150 IPR046347 GO:0003700|GO:0006355
Alju06g2812 206 CDD bZIP_plant_GBF1 100 148 IPR045314 GO:0003700|GO:0006355
Alju06g2812 206 SMART brlzneu 95 159 IPR004827 GO:0003700|GO:0006355
Alju06g2812 206 Pfam bZIP transcription factor 99 157 IPR004827 GO:0003700|GO:0006355
Alju06g2812 206 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 62 183 IPR044521 -
Alju06g2812 206 MobiDBLite consensus disorder prediction 69 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2812 Alju-ChrAlju06 55061231 55061851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2812 75 203 bZIP Transcription Factor Family AT5G60830 48.529 6.95e-33 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju06g2812 bZIP_1 7.6e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g1345 13 32183704 32184273 Alju06g2812 06 55061231 55061851 CCT