Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2796 ATGGCTGTCCTTCCCCTCGGCGAACATATCTTGCCGATAATTCTAATTGCGGCTTTGCTTTGCCATATTTTCTATTTCATTTATCAAATCCGCGTTGGCCGCCTCCGCCTCCGCCTCCGCCACCACTATCTAAGCCACCCTCCCTCTCCCGATCTCAGTCCCTATCCTCATGCTCCCGCCAATTCTCCCCTTGAATCTTGGCTTTTCAAGCGCCTTCCCACCTCCACTTACTCCTCCTCCTCCACCGTCGAAGCAGACGGACACAGTCACCCCTCGCTGGAGTGTGTTGTCTGTTTGGACGAGTTCAATGAAGGAGACTTATTACGAGTGCTCCCGAACTGCGACCACTTCTTTCACCTCAATTGCATCGATGAGTGGCTCCAAACAAACAAGACTTGCCCATTGTGCCGAGAGGTCGTCAAGCCACCGCCAATAATCACGTCACGGCATGAAAATATAGAAGCGTCTGCTGGAGAAGTTCAATTGGAGAATTCGTCGAATGAAGATCTTCCTCCACAAATTTGGTTCCCCAGGAACCCATGTCAGTTGATAGACTTGGAACAAGTGGTGATAGATATTCCCGAGGAAGACCATCGCAACAGGTAG 606 0.5066 MAVLPLGEHILPIILIAALLCHIFYFIYQIRVGRLRLRLRHHYLSHPPSPDLSPYPHAPANSPLESWLFKRLPTSTYSSSSTVEADGHSHPSLECVVCLDEFNEGDLLRVLPNCDHFFHLNCIDEWLQTNKTCPLCREVVKPPPIITSRHENIEASAGEVQLENSSNEDLPPQIWFPRNPCQLIDLEQVVIDIPEEDHRNR 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2796 201 SMART ring_2 95 136 IPR001841 -
Alju06g2796 201 Pfam Ring finger domain 94 137 IPR001841 -
Alju06g2796 201 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 56 143 IPR013083 -
Alju06g2796 201 ProSiteProfiles Zinc finger RING-type profile. 95 137 IPR001841 -
Alju06g2796 201 CDD RING-H2_EL5-like 94 137 - -
Alju06g2796 201 PANTHER RING-H2 FINGER PROTEIN ATL16 10 166 IPR044600 GO:0016567|GO:0016740
Alju06g2796 201 SUPERFAMILY RING/U-box 94 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2796 Alju-ChrAlju06 54890554 54891159 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2796 13 140 C3H Transcription Factor Family AT1G20823 37.121 5.43e-22 87.0