Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2795 ATGCTCTTGGCCGCTTTCGAACGTCTCTTCGTAATAATAATAACTGCCTTTTTGTTCTGGCAATTTTACAGTTGCTGTTATCTCCGCCGCATCCGCCGAGCTTCCTATCGAAGCCGTTCATTTACCGCTCACATTCTCCATCCTCCTTCTCCCGCCCGTTCTCCCCTCCATCCTTCGCTTTTCGATCTCCTTCCCATCTCCACCTACCCCTCCGCCGCTGGGGCAGACGAGCACAGTCAAGCTTCGCCGGAGTGTGCCATCTGCTTGGACGAGTTCAAAGAAGGAGACATAGGGCGAGTGCTCCCGAACTGCGACCACTTCTTTCACCTCGATTGTATCGATGAGTGGCTCCGAACAAACAAGACTTGCCCATTGTGCCGAGAGGTCGTCAAGCCGCCGCCGAAAATCAAGCCGCCACATGAAAATGCAGAAGCGTCTGCTGGAGAAGAAGGTCAGTTGGAGAATTCGTCGAATGTAAATCTTCCTCCGCCAATTTGGTGCCCCGGAAACACAAACACAAGGCAGGTGATAGAATCAGAACAAGTGGTAATAGAGATTCCTGAGGAAGACCATCGCTGGAGTTAG 585 0.5197 MLLAAFERLFVIIITAFLFWQFYSCCYLRRIRRASYRSRSFTAHILHPPSPARSPLHPSLFDLLPISTYPSAAGADEHSQASPECAICLDEFKEGDIGRVLPNCDHFFHLDCIDEWLRTNKTCPLCREVVKPPPKIKPPHENAEASAGEEGQLENSSNVNLPPPIWCPGNTNTRQVIESEQVVIEIPEEDHRWS 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2795 194 CDD RING-H2_EL5-like 84 127 - -
Alju06g2795 194 SUPERFAMILY RING/U-box 76 138 - -
Alju06g2795 194 MobiDBLite consensus disorder prediction 134 165 - -
Alju06g2795 194 SMART FANCL_C_2 81 132 - -
Alju06g2795 194 ProSiteProfiles Zinc finger RING-type profile. 85 127 IPR001841 -
Alju06g2795 194 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 9 170 - -
Alju06g2795 194 SMART ring_2 85 126 IPR001841 -
Alju06g2795 194 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 132 IPR013083 -
Alju06g2795 194 Pfam Ring finger domain 84 127 IPR001841 -
Alju06g2795 194 MobiDBLite consensus disorder prediction 149 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2795 Alju-ChrAlju06 54886060 54886644 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2795 1 177 C3H Transcription Factor Family AT2G42360 33.898 1.51e-25 97.1