Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2794 ATGGCTGTCGACAATGATTTTAACGACCAGAAAATCCTCCTGGCCGCTTTCGAACGTCTCTTGATAATTATGATTATTGCCATTTTGCTTTGGGAATTGTACAGTTGCTGTTGTCTCCGCCGCCTCCGCCCCTCTCGAAGCCGTTCCTTTACCAATCACGTTCTCCATCCTCCTGCTCCCACCTGTTCTCCCCTTCATCCTTCGCTTTTCGATCTCCTTCCCACCTCCACCTACTCCGCCGCCGCCGCCGGAGCAGACGAGCACAGTCAAGCTCCGCTAGAGTGTGCCATCTGCTTGGACGAGTTCAAAGAAGGAGACATAGGGCGAGTGCTTCCAAACTGCGACCACTTCTTTCACCTTGATTGCATCGATAACTGGCTCCGAACAAACAAGACTTGCCCACTGTGCCGAGAGGTCGTCAAGCCGCCGCCGAAAATCACGCGGCCGCATGAAAATGCAGAAGCGTCTGCTGGAGAAGAAGGTCAGTTGGAGAATTCGTCGAATGTAAATCTTCCTCCGCCAATTTGGTGCCCCAGAAACACAAGGCATCAGGTGATAGAATCAGAACAAGTGGTAATAGAGATTCCTGAGGAAGACCATCGCCGGAGTCAGAGGCAGAGCACGTCTCTCTACGCTCGTCGCTCGCCTTCCTCTCTCGCTCTGAATCTCTCCTTCTTCTCCTCTACGGCCGGCGGCCGGCCACTCTCCCCTCCCTCTCAACTCCGTCACTGTATCAGTCTCCCCCTCTCCGGTCTCTCTCTCTCATCTCATCACTCGTGGGTTGTGGTCGACTGGTCGTGGCTCTCTCTCGTCTACGCCTGCAATATCTCCGACTCTCACTCTGTCGGGCTCTTACTCACCGGACATCGCAGGTTTACCTTTTTCCCTAATTGCTTGCAACCGGACCCTAAGAAGAAGGGGTGA 924 0.539 MAVDNDFNDQKILLAAFERLLIIMIIAILLWELYSCCCLRRLRPSRSRSFTNHVLHPPAPTCSPLHPSLFDLLPTSTYSAAAAGADEHSQAPLECAICLDEFKEGDIGRVLPNCDHFFHLDCIDNWLRTNKTCPLCREVVKPPPKITRPHENAEASAGEEGQLENSSNVNLPPPIWCPRNTRHQVIESEQVVIEIPEEDHRRSQRQSTSLYARRSPSSLALNLSFFSSTAGGRPLSPPSQLRHCISLPLSGLSLSSHHSWVVVDWSWLSLVYACNISDSHSVGLLLTGHRRFTFFPNCLQPDPKKKG 307
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2794 307 CDD RING-H2_EL5-like 94 137 - -
Alju06g2794 307 SUPERFAMILY RING/U-box 88 144 - -
Alju06g2794 307 Pfam Ring finger domain 94 137 IPR001841 -
Alju06g2794 307 MobiDBLite consensus disorder prediction 144 170 - -
Alju06g2794 307 ProSiteProfiles Zinc finger RING-type profile. 95 137 IPR001841 -
Alju06g2794 307 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 143 IPR013083 -
Alju06g2794 307 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 20 215 - -
Alju06g2794 307 SMART ring_2 95 136 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju06g2794 Alju-ChrAlju06 54866972 54870769 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2794 9 171 C3H Transcription Factor Family AT2G42360 38.037 3.34e-23 94.0