Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2787 ATGGGCTCAACAAGTGAAACAGCTCCTCTCTTAGAGCGCAAGGAAGAGGGAAAGAGCAAAAGTGACTCATTGAATGAACTGACAGACCTTGAACGTGGTGAAGCAGCAACAAATGTGGGATTTGGCAGGGTGCTCTCACTTGCAAAGCCTGAAGCTGGGAAGCTGATTTTCGCAACTCTGGCTCTTTTAGTTGCATCCACATCAGATATTTTAATTCCAAAATTTGGTGGGAAGATAATTGATATTGTCTCAGGGAATATTCAAACTCCTGAAGATAAAGCTAAAGCTTTGGAAGCTGTTAAGAGCACCATACTGTACATTTTTATGATTGTTGTTGTTGGATCAGTTTCAACAGCACTTGATGATTGGCTTTTTTCCTCAGCAAGTGAAAAGGTTGTTGCTCGACTTAGGAAAAGATTATTTGGTCACCTCATAATCCAGGAGATAGCCTTCTTTGATGTAACCCGTACCGGGGAACTTATGAGTAGGCTCTCTGAAGATACACAGATCATAAAAAATGCAGCAACTACCAATCTTTCTCATGCACTGAGTGCCTTATCAACTGCATTTATTGGTCTTGGCTTCATGTTTTTGACGTCATGGAAGTTAACATTGTTGGCTTTAGCTGTTGTGCCTGCTACTTTTATTGCTGCACGTAAATTCGGTTGGTTCCTACGGGAACTTTCTCAGAAAACTCAAGATGCAGCTGCAGCAGCAGCTTCAATAGCTGAGGAATCCTTTGGCGCCATAAGGACAGTAAGATCTTTTGCCCAAGAAGAATATGAAATATTACGCTACTCTAAGAAAGTTGATGAGACACTTAAGCTTGGGCTTAAACAAGCTAAAGTTGTGGGACTCTTTTCTGGAGGCATTTACACAGCAACTTCCTTGCCAATTATTATAGTTGTCATCTATGGGGCATATTTGACAACTACAGGTTCCATGTCCCCCGGTGATCTTACGTCCTTCATTCTTTATAGTCTCACAGTGGGACATTCTATATCTGGTCTCTCAGGATTGTATACCATGGCCATGAAAGCTGTGGGTTCAAGCAGAAGGGTGTTTCACCTTCTTGATCTTGAATCATCAATGCCAATGCCAGGAAATAAATGTCCTCTGGGAGAACAAGATGGGGAGGTGGAGCTAAATGATGTCTGGTTTGCATATCCATCTCGTCCTAGTCATATGGTACTTAAGGGAATTACAATGAAATTGCAGTCTGACTCAAAGGTTGCTCTTGTTGGTCCAAGTGGTGGTGGAAAGACTACAATAGCAAACTTAATTGAAAGATTTTATGACCCAACCAAGGGACAGATCCTGCTGAATGGGGTTCCACTGGTAGAAGTATCACATGAGCATCTGCACAAGAAGATCAGTATTGTGAGTCAAGAGCCTGTACTTTTCAACTGTTCCATTGAGGAGAACATAGCTTATGGATTTGATGGCAAAGTAAATCCTGCTGATATAGAAAATGCAGCAAAAATGGCAAATGCACATGAATTCATATCAAAATTCATAGATAAATACAAGACCCATGTTGGGGAGCGTGGGGTAAGGCTTTCAGGAGGGCAGAAACAGAGAATAGCAATTGCCAGAGCTCTACTTATGGACCCAAAAATTCTTCTCCTGGATGAAGCCACTAGTGCCCTCGATGCTGAAAGTGAATATTTAGTACAGGATGCTATGGACAGACTGATGAAGGGAAGGACAGTTCTAGTCATAGCTCATAGGCTATCAACAGTGAAGAGTGCTGATAGAGTAGTGGTTGTTTCTGATGGTGAAATTGTGGAGAGTGGGACCCATGAAGAACTTCTCAGCAACAATGGTGTCTATTCTGCTTTAGTCAGTAGACAGCTCCAAACAATGAAACCTCAATATCTTGCGTTAGTATCTTTCTTATATGAGGCAATGCGGAAGAGGAAGCAGAGCAAGAAAAGCCGGGCCATCACACTTCCTTCTTACGTCGAAGCGGCTTTAATGGAGACGTTGGTCACTCGCAAGCCTCTCTCCAATCTTCCTGTTTAG 2025 0.4232 MGSTSETAPLLERKEEGKSKSDSLNELTDLERGEAATNVGFGRVLSLAKPEAGKLIFATLALLVASTSDILIPKFGGKIIDIVSGNIQTPEDKAKALEAVKSTILYIFMIVVVGSVSTALDDWLFSSASEKVVARLRKRLFGHLIIQEIAFFDVTRTGELMSRLSEDTQIIKNAATTNLSHALSALSTAFIGLGFMFLTSWKLTLLALAVVPATFIAARKFGWFLRELSQKTQDAAAAAASIAEESFGAIRTVRSFAQEEYEILRYSKKVDETLKLGLKQAKVVGLFSGGIYTATSLPIIIVVIYGAYLTTTGSMSPGDLTSFILYSLTVGHSISGLSGLYTMAMKAVGSSRRVFHLLDLESSMPMPGNKCPLGEQDGEVELNDVWFAYPSRPSHMVLKGITMKLQSDSKVALVGPSGGGKTTIANLIERFYDPTKGQILLNGVPLVEVSHEHLHKKISIVSQEPVLFNCSIEENIAYGFDGKVNPADIENAAKMANAHEFISKFIDKYKTHVGERGVRLSGGQKQRIAIARALLMDPKILLLDEATSALDAESEYLVQDAMDRLMKGRTVLVIAHRLSTVKSADRVVVVSDGEIVESGTHEELLSNNGVYSALVSRQLQTMKPQYLALVSFLYEAMRKRKQSKKSRAITLPSYVEAALMETLVTRKPLSNLPV 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2787 674 Gene3D - 374 623 IPR027417 -
Alju06g2787 674 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 380 617 IPR003439 GO:0005524
Alju06g2787 674 SMART AAA_5 407 594 IPR003593 GO:0016887
Alju06g2787 674 MobiDBLite consensus disorder prediction 1 24 - -
Alju06g2787 674 PIRSF ABC_prm/ATPase_B 2 647 - -
Alju06g2787 674 Gene3D ABC transporter type 1, transmembrane domain 39 366 IPR036640 GO:0005524|GO:0016020
Alju06g2787 674 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 56 346 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju06g2787 674 FunFam ABC transporter B family member 25 107 377 - -
Alju06g2787 674 Pfam ABC transporter transmembrane region 55 329 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju06g2787 674 ProSitePatterns ABC transporters family signature. 520 534 IPR017871 GO:0005524|GO:0016887
Alju06g2787 674 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 20 622 IPR039421 -
Alju06g2787 674 MobiDBLite consensus disorder prediction 9 24 - -
Alju06g2787 674 FunFam ABC transporter B family member 25 378 620 - -
Alju06g2787 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 371 618 IPR027417 -
Alju06g2787 674 SUPERFAMILY ABC transporter transmembrane region 43 361 IPR036640 GO:0005524|GO:0016020
Alju06g2787 674 CDD ABC_6TM_AtABCB27_like 58 354 - -
Alju06g2787 674 Pfam ABC transporter 398 548 IPR003439 GO:0005524
Alju06g2787 674 CDD ABC_MTABC3_MDL1_MDL2 380 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2787 Alju-ChrAlju06 54783779 54790367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2787 72 618 Calmodulin-binding Proteins AT2G36910 36.984 2.20e-99 330
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2787 06 54783779 54790367 Alju06g2787 06 54783779 54790367 ECH