Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2782 ATGATGATTGGGAATTCAAGAAGAGGTTACCAAGGGAAGCAAGAGGATGATGAGGATAATAGCACTGCTCATCTTCATCAACATCAGCAACACCACATGATTAGTAACAGTATTGAGAAGCTGTACAGCAAGGTAGGCTCATCTACTTCTGGTCTGAGAAACCCGAGGATCGTGCGAGTGTCACGGACTTTTGGAGGCAAAGATAGGCATAGCAAGGTGTGCACCATAAGAGGGCTAAGAGACAGAAGGATCAGGCTATCTGTGCCCACAGCAATTCAGCTATATGAGCTTCAAGATAGGCTTGGCCTTAACCAGCCCAGCAAGGTCATTGATTGGCTCATTGAAGCCACTAAACAAGACATTGATAAGCTCCCTCCTCTTCCCATCCCTCTTGGTTTCCCCCAATTTCATCATCAACCCAACCAAACCCTACTTCATGATCATCAATCAAGTTCTTCCTCTCATCATAATTTTGGAGCTAATTTCTTTGGTGCTAATAATAATAATAATAATAATAATACTAGTTTCATGGATAAAGGGAAGTGGGTGATGAAAACAAACAATGAAGAAGATGGAATTATTGCTGGTTCTGCTCACAATCTTTTCCCATCTGGGAATAATTCTTCTTCCTCTTCTTCTTCTTCTCAGTATTATAATAATCCCTTACATTCTGAGCCTTCAAATTTTCTATCTTTATTTGGAAGCCATGGTAATAGTGTGTTCCCTAGTAATAGTAATAACAATAATCACCACCAGGTTGATCCTAATGGCCATATTAGTGTGCAGTTTCCATCTTCCTCGCAACTTTTGTTCTGTCCAAGTACATCTCCTGCAACAACACCTTCGTCACTTTTTGCTGCTCCTTATTATGCTCCTTCTTCATATTCCTCAGTGTCACTTGAAACGGACCCAAGAATAATGCAACAACAATTGATGAACCATATTCAGTTCATGACCTCATCCAATAATTCTCATCCTCATCATCCTCTTGTTCTTCCATCTCTGAAACCCCTAATTCCCACACCTCCTTTTAGTTCCAGGCTTCTTGATTCAAATGATAAGGATACTGCTCCGTCTTGA 1080 0.4065 MMIGNSRRGYQGKQEDDEDNSTAHLHQHQQHHMISNSIEKLYSKVGSSTSGLRNPRIVRVSRTFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYELQDRLGLNQPSKVIDWLIEATKQDIDKLPPLPIPLGFPQFHHQPNQTLLHDHQSSSSSHHNFGANFFGANNNNNNNNTSFMDKGKWVMKTNNEEDGIIAGSAHNLFPSGNNSSSSSSSSQYYNNPLHSEPSNFLSLFGSHGNSVFPSNSNNNNHHQVDPNGHISVQFPSSSQLLFCPSTSPATTPSSLFAAPYYAPSSYSSVSLETDPRIMQQQLMNHIQFMTSSNNSHPHHPLVLPSLKPLIPTPPFSSRLLDSNDKDTAPS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2782 359 Pfam TCP family transcription factor 66 183 IPR017887 -
Alju06g2782 359 MobiDBLite consensus disorder prediction 10 26 - -
Alju06g2782 359 ProSiteProfiles TCP domain profile. 66 124 IPR017887 -
Alju06g2782 359 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 31 306 IPR005333 GO:0003700
Alju06g2782 359 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2782 Alju-ChrAlju06 54737391 54738470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2782 11 137 TCP Transcription Factor Family AT5G60970 66.142 1.14e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Alju06g2782 TCP 1e-26 No_clan