Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2774 ATGGAGGCGTTATTAGAAATTATCAAGGTGATTGGAAACCCTGCTTTCTTGAGCGGGTGCCGTGTGTGTTTCTTTCTACCTCCTTCATCGTTTCCCCCTTCCTCCTCCCTTGCAGTCATGGCCGCAGCTGCTCGCCCCCTCGTCACCGTCCAAACCCTTGAAGCCGATATGGCTACCGATTCCCCACAAGCCATTCCTCTCCCAGACGTCATGAAAGCTTCGATCCGACCCGACATCGTCACCTTCGTTCACTCCAACATTTCCAGGAACAGCCGTCAGCCCTACGCTGTCAGCAGGCGCGCTGGTCATCAGACCTCAGCCGAATCATGGGGAACTGGTCGTGCCGTGTCTCGTATCCCACGTGTTCCTGGTGGCGGTACCCATCGTGCTGGTCAGGCTGCTTTCGGCAACATGTGCCGTGGTGGCCGCATGTTCGCTCCGACTAAGATTTGGCGCCGCTGGCACCGGAGGGTTAATGTGACTCAGAAGCGGCACGCTGTCGTTTCAGCCATTGCTGCATCGGCTGTTACATCTCTGGTTTTAGCTCGCGGTCACAGGATTGAATCAGTGCCGGAAATGCCTTTGGTGGTAGGTGATTCTGCCGAGGGTGTTGAGAAGACCAAAGATGCGATCAAAGTTTTGAAGCAGATCGGCGCATTTCCTGATGCTCAAAAGGCGAAGGACAGTCACGCAATCAGGCCTGGTAAAGGCAAGATGAGAAATCGTCGCTATATCCATCGCAAGGGTCCTCTGATTGTATATGGAACTGAAGGAGCTAAAGCAGTTAAGGCATTCAGGAACATCCCTGGTGTTGAAGTTGCGAATGTGGAGAGACTGAATCTGCTTAAGCTAGCCCCTGGTGGTCATCTTGGGAGGTTCGTTATTTGGACCAAATCCGCGTTTGAGAAGCTGGATTCTATATATGGATCATTCGACAAAGCATCAGAGAAGAAGAAGGGTTACCTGCTACCGAGAGCCAAGATGGTCAATTCTGATTTGGCTAGAATTATTAACTCTGATGAGATCCAGTCGGTTGTGAGGCCGATCAGAAAGGAAGTCAAGAGGGCACCCTTGAAGAAGAACCCGCTCACGAATCAGAATGTCATGTTCAAGCTGAATCCATATGCCAAGACGCACAAGAGGAATGCTCTGCTGGCTGAAGCTCAGCGTGTGAAAGCTAAGCAAGAGAAGCTTGACAAGAAGAGGAAGTCCCTCCCTAAGAAGGACGCATCTGCGATCAAGGCTGCAGGGAAGGCATGGTACCACACCATGATCTCTGACAGCGATTACACAGAGTTCGAGAACTTCTCAAAATGGTTGGGTGTCTCGCAGTGA 1335 0.5154 MEALLEIIKVIGNPAFLSGCRVCFFLPPSSFPPSSSLAVMAAAARPLVTVQTLEADMATDSPQAIPLPDVMKASIRPDIVTFVHSNISRNSRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNVTQKRHAVVSAIAASAVTSLVLARGHRIESVPEMPLVVGDSAEGVEKTKDAIKVLKQIGAFPDAQKAKDSHAIRPGKGKMRNRRYIHRKGPLIVYGTEGAKAVKAFRNIPGVEVANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFDKASEKKKGYLLPRAKMVNSDLARIINSDEIQSVVRPIRKEVKRAPLKKNPLTNQNVMFKLNPYAKTHKRNALLAEAQRVKAKQEKLDKKRKSLPKKDASAIKAAGKAWYHTMISDSDYTEFENFSKWLGVSQ 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2774 444 MobiDBLite consensus disorder prediction 94 112 - -
Alju06g2774 444 ProSitePatterns Ribosomal protein L1e signature. 159 185 IPR013000 -
Alju06g2774 444 Coils Coil 381 401 - -
Alju06g2774 444 FunFam 60S ribosomal protein L4 42 347 - -
Alju06g2774 444 Gene3D - 42 347 IPR023574 GO:0003735|GO:0005840|GO:0006412
Alju06g2774 444 SUPERFAMILY Ribosomal protein L4 61 306 IPR023574 GO:0003735|GO:0005840|GO:0006412
Alju06g2774 444 PANTHER 60S RIBOSOMAL PROTEIN L4 43 437 IPR045240 -
Alju06g2774 444 Pfam Ribosomal protein L4/L1 family 65 305 IPR002136 GO:0003735|GO:0005840|GO:0006412
Alju06g2774 444 MobiDBLite consensus disorder prediction 94 130 - -
Alju06g2774 444 Pfam 60S ribosomal protein L4 C-terminal domain 319 391 IPR025755 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2774 Alju-ChrAlju06 54685901 54689006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2774 41 444 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 81.436 0.0 662