Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2736 ATGTCAGAGCAGGAAACACAGTCACGGGGTTTCATCGTCGTGTGTTTCTTAATTCTTTTTTCAGGTAAAACTGTTGCCCAAGATTTTCTGGACACAGAGAGACAAATTCTTCTAGAGCTGAGAACTTATCTAGACAATCAAACTCGAACAGATCGAGGAAGATACAAACTCTGGAACACAAACAGCTCAAATCCGTGTCAATGGCCAGGAATCACATGCAGCCGCCCTACAGGGACAACAACCTCGGCGGCGGTGAGAGTGGTCGGAATAGACCTTTCCGACAGCAGCATCGCTGGCGAGATTTTTAAGAATTTCTCGCAGCTTACCGAGCTCACTCACCTTGACCTTTCCGCAAACACCATCATCGGAGAAATCCCAACGGATCTAAGTCGATGCAGTAACCTCGTACATCTCAATCTCTCCCATAATCTTCTCGAGGGAGAGATGGATTTAACTGGATTGACAAGGTTAGAGACACTAGACTTGTCGCAAAACAGGCTTCACGGTGAGATAGGCTTGAATTTTCCAGCCATATGTGACAACTTAGTTACTTTGAATGTTTCTGGGAATAACTTCACTGGTTCCATTGATCATTGTTTCGATCAGTGTTCAAAATTGCAGTACTTGGATTTGAGCACCAACGATCTCAGTGGAGGTGTCTGGATGGGATTTGCGACGCTGAAGGAGTTTTCAATTTCAGAGAACTATATCACTGGGCCTCTCATTGAACAAGCATTCCCAGAAAACTGTAACCTCAAAGTCCTCGACGTTTCATACAATGGATTTACAGGAATTGCTCCGAAGAATATCAGTAAATGTAAGAATCTAGCGATTCTGAATCTTTCAAGTAACAAATTTTCTGGGGATATCCCCATTGAATTGGGATCAGTCTCAAGCCTCCAAGCTTTGTACTTTGCCAACAATACATTCTCAAGAAGCATCCCAGAGACACTCTCAAACTTGACAAACCTAAATTTCTTGGATTTGAGCGGTAATGGTTTCGGTGGAGAGATACAAGACACATTTGGGAAGCTCAAGCAAGTTAAGTTCCTACTTTTGCATTCAAATGCTTACACTGGAGGATTAAACTCATCAGGCATTCTCAAATTACCCAACATTTCTCGCTTAGACCTTAGTAACAACAGTTTTTCAGGTCGATTACCTAATGAAATCTCTCAGATGACTTCCCTGAAGTTCTTAATCTTGGCCCATAATCAATTCACTGGAACTATTCCTCATGAGTTTGGAAATTTGGCTCAGCTTCAAGCACTTGATATTTCTTTCAACAATTTAACAGGGCCAATCCCGTCAAGCCTGGGTAATTTGGGTTCTCTCTTATGGTTAATGCTTGCCAACAATTCATTGACCGGAGAAATCCCAAAAGAGCTAGGAAATTGCACAAGCTTGCTGTGGCTAAACCTAGAAAACAATAATCTCTCTGGGAATTTCCCTCCTGAATTGACCAAAATTGGAAGAAACTCCATGGCCACATTTGAATTGAATCGTAATGAAGTCAATGGAAATATCCCTGCCGGTTCTGTTGAATGTTCAGCAATGAAAAGATGGATTCCTGCAGATTACCCTCCGTTCATTTTTGTGTATAGCATCCTCACAAGGAAAAATTGCATAAGCATTTGGGATAGATTACTTAAAGGGTATGGAATTTTCCCAATTTGTTCATCTGGGTCATTTTTTCGATTGAAGGAGATTTCTGGGTATGTTCAGTTAAGTGGGAATAATCTCATCGGAGAAGTTCCTTCAGAAATTGGGAACATGCAAAATTTCAGCATGCTGCATTTAGGGTTGAACAAATTTTCTGGGGAAATCCCTGCGGTGATGGGAGATCTGCCACTCGTGGTGTTGAACATAACAAGAAACAACTTTTCAGGTGAGATTCCATGGGACATTGGAAACCTTAAATGTCTTAGGAATCTGGATTTGTCCTACAACGATTTCTCTGGGACATTCCCTACAAGCTTGAACAACTTGACAGAGCTCAGTAAATTCAACATCTCTTACAATCCTTTGATTTCTGGGACAATCCCACCAACAGGACAATTAGCCACATTTGATGAAGATTCGTATTTGGGAGACCCACTTTTGACCCTACCCAGCTTCATCGATAACGTCCCAGACGACCCAAAAAAAAACACAACCGCTCATAGAGACCACAAAATCAAAAACAGAAACCCCACGAAACTGTCAATGTTCTTGGCGTTTCTTGCTATGACACTTGCTCTGTTGGTATTCGGGCTAATCTCTTTCATAGTATGTTCATTAGCGAAAACACGTTCACATGACCCAGAAGGATACCTATTGGAAGACACAAAAAGTCATCAAGACTCCGACAATTCATCACCATGGTCGTCCGACCAAATTAAGGTTATCCACTTGAACAAGATCGCATTCACGCACGCCGACATTCTCCAAGCCACCGGAAACTTCTCTGATAACAGAGTCATCGGAAAAGGCGGTTTTGGCACCGTGTACAGAGGAATATTCCCGGGCGGAATAGAAGTCGCAGTGAAGAAGCTTCAAAGAGAAGGACTCGAAGGAGAGAGAGAGTTCAGAGCAGAAATGGAAGTTCTGAGCGGAAACGGGTTCGGTTGGCCCCACCCGAATTTAGTAACCCTATACGGGTGGTGCCTAAACGGGTCGGATAAAATCCTGGTTTATGAATACATGGAAGGAGGAAGCTTGGAAGATTTTGTTACAGATAGAACAAGACTCACGTGGAAAAGAAGGTTAGAGATCGCCATTGATGTGGCTCGAGCTTTGGTTTATTTGCACCATGAATGTTTCCCGCCAATTGTTCACAGAGACGTGAAGGCTAGCAACGTGCTCTTGGATAAACATGGGAAGGCTAAAGTTACAGACTTTGGGCTAGCAAGAGTGGTGGAAAACGGAGTGAGTCACGTGACCACCATGGTCGCCGGTACGGTGGGCTACGTGGCACCAGAGTATGGTCAGACATGGAAGGCGACAACCAAAGGTGATGTGTACAGCTTTGGAGTGGTGGCTATGGAGTTGGCCACCGGAAGGAGGGCGGTGGACGGTGGTGAGGAGTGCTTGTTGGAGTGGGCTCGACGGGTCACGGGCTATGGATATTGTCTGACCCGGCCCATTATACCAGTGTTGTTGATGGGCTCTGGGCTGGGAGAGGGGTCGGAGGAGATGGGTGAATTGTTACGGATTGGGATCAAGTGTACGGCAGAGGCACCGCAAGCGAGGCCCAACATGAAGGAGGTCTTGTCTATGCTGGTTAACATATTGTACCCACAAGGGGAGTGA 3291 0.4439 MSEQETQSRGFIVVCFLILFSGKTVAQDFLDTERQILLELRTYLDNQTRTDRGRYKLWNTNSSNPCQWPGITCSRPTGTTTSAAVRVVGIDLSDSSIAGEIFKNFSQLTELTHLDLSANTIIGEIPTDLSRCSNLVHLNLSHNLLEGEMDLTGLTRLETLDLSQNRLHGEIGLNFPAICDNLVTLNVSGNNFTGSIDHCFDQCSKLQYLDLSTNDLSGGVWMGFATLKEFSISENYITGPLIEQAFPENCNLKVLDVSYNGFTGIAPKNISKCKNLAILNLSSNKFSGDIPIELGSVSSLQALYFANNTFSRSIPETLSNLTNLNFLDLSGNGFGGEIQDTFGKLKQVKFLLLHSNAYTGGLNSSGILKLPNISRLDLSNNSFSGRLPNEISQMTSLKFLILAHNQFTGTIPHEFGNLAQLQALDISFNNLTGPIPSSLGNLGSLLWLMLANNSLTGEIPKELGNCTSLLWLNLENNNLSGNFPPELTKIGRNSMATFELNRNEVNGNIPAGSVECSAMKRWIPADYPPFIFVYSILTRKNCISIWDRLLKGYGIFPICSSGSFFRLKEISGYVQLSGNNLIGEVPSEIGNMQNFSMLHLGLNKFSGEIPAVMGDLPLVVLNITRNNFSGEIPWDIGNLKCLRNLDLSYNDFSGTFPTSLNNLTELSKFNISYNPLISGTIPPTGQLATFDEDSYLGDPLLTLPSFIDNVPDDPKKNTTAHRDHKIKNRNPTKLSMFLAFLAMTLALLVFGLISFIVCSLAKTRSHDPEGYLLEDTKSHQDSDNSSPWSSDQIKVIHLNKIAFTHADILQATGNFSDNRVIGKGGFGTVYRGIFPGGIEVAVKKLQREGLEGEREFRAEMEVLSGNGFGWPHPNLVTLYGWCLNGSDKILVYEYMEGGSLEDFVTDRTRLTWKRRLEIAIDVARALVYLHHECFPPIVHRDVKASNVLLDKHGKAKVTDFGLARVVENGVSHVTTMVAGTVGYVAPEYGQTWKATTKGDVYSFGVVAMELATGRRAVDGGEECLLEWARRVTGYGYCLTRPIIPVLLMGSGLGEGSEEMGELLRIGIKCTAEAPQARPNMKEVLSMLVNILYPQGE 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2736 1096 FunFam Leucine-rich repeat receptor protein kinase MSP1 777 894 - -
Alju06g2736 1096 PANTHER LEUCINE RICH REPEAT KINASE 2 88 225 - -
Alju06g2736 1096 SMART serkin_6 815 1087 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2736 1096 Pfam Protein kinase domain 816 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2736 1096 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Alju06g2736 1096 ProSitePatterns Serine/Threonine protein kinases active-site signature. 937 949 IPR008271 GO:0004672|GO:0006468
Alju06g2736 1096 FunFam Leucine-rich repeat receptor-like protein kinase 895 1095 - -
Alju06g2736 1096 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 243 338 - -
Alju06g2736 1096 Gene3D Ribonuclease Inhibitor 176 241 IPR032675 -
Alju06g2736 1096 FunFam Putative LRR receptor-like serine/threonine-protein kinase 345 507 - -
Alju06g2736 1096 Pfam Leucine rich repeat 156 216 IPR001611 GO:0005515
Alju06g2736 1096 Pfam Leucine rich repeat 420 479 IPR001611 GO:0005515
Alju06g2736 1096 Pfam Leucine rich repeat 251 308 IPR001611 GO:0005515
Alju06g2736 1096 Gene3D Phosphorylase Kinase; domain 1 776 894 - -
Alju06g2736 1096 SMART LRR_sd22_2 154 175 - -
Alju06g2736 1096 SMART LRR_sd22_2 639 665 - -
Alju06g2736 1096 SMART LRR_sd22_2 418 444 - -
Alju06g2736 1096 SMART LRR_sd22_2 108 127 - -
Alju06g2736 1096 ProSiteProfiles Protein kinase domain profile. 815 1092 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2736 1096 SMART LRR_typ_2 442 466 IPR003591 -
Alju06g2736 1096 SMART LRR_typ_2 154 174 IPR003591 -
Alju06g2736 1096 SMART LRR_typ_2 108 132 IPR003591 -
Alju06g2736 1096 SMART LRR_typ_2 297 321 IPR003591 -
Alju06g2736 1096 SMART LRR_typ_2 394 417 IPR003591 -
Alju06g2736 1096 SMART LRR_typ_2 418 441 IPR003591 -
Alju06g2736 1096 SMART LRR_typ_2 370 393 IPR003591 -
Alju06g2736 1096 SUPERFAMILY Protein kinase-like (PK-like) 789 1088 IPR011009 -
Alju06g2736 1096 SUPERFAMILY L domain-like 224 485 - -
Alju06g2736 1096 Gene3D Transferase(Phosphotransferase) domain 1 895 1094 - -
Alju06g2736 1096 Gene3D Ribonuclease Inhibitor 435 523 IPR032675 -
Alju06g2736 1096 Gene3D Ribonuclease Inhibitor 29 175 IPR032675 -
Alju06g2736 1096 ProSitePatterns Protein kinases ATP-binding region signature. 821 844 IPR017441 GO:0005524
Alju06g2736 1096 Gene3D Ribonuclease Inhibitor 555 718 IPR032675 -
Alju06g2736 1096 SUPERFAMILY L domain-like 56 308 - -
Alju06g2736 1096 Gene3D Ribonuclease Inhibitor 242 337 IPR032675 -
Alju06g2736 1096 Gene3D Ribonuclease Inhibitor 338 434 IPR032675 -
Alju06g2736 1096 CDD STKc_IRAK 821 1090 - -
Alju06g2736 1096 ProSiteProfiles Leucine-rich repeat profile. 134 155 IPR001611 GO:0005515
Alju06g2736 1096 SUPERFAMILY L domain-like 573 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2736 Alju-ChrAlju06 54358921 54362506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2736 66 1090 Receptor kinase-like Gene Family AT5G07280 33.731 6.18e-152 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Alju06g2736 Pkinase 1.5e-44 CL0016