Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2730 ATGGCGCTGTTCAGAAGGTTCTTTTACAGGAAGCCGCTGGATCGGCTTGTGGAGATCTCCGAGAGAGTTTATGTTTTTGATTGTTGCTTCTCCACAGATGTCTTGGAAGAAGATGGATATAAAGTTTATATGGGGGGGATCGTGGCTCAGCTACAGGATCACTTTCTTGATGCCTCTTTCATGGTGTTTAACTTCAGGGAAGGAGAGAAGCGCAGTCAAATTTCAGATATATTGTCTCAATATGACATGACAGTCATGGAATACCCTTGTCAATATGAGGGTTGTCCTCTTCTGCCTTTGGAAATGATCCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGGCAACAGAATGTTCTTTTGATGCATTGTGAAAGAGGAGGTTGGCCTGTGCTTGCATTTATGTTAGCAGGTCTTCTATTGTACCGGAAACAGTACAATGGGGAGCAAAAAACCCTTGAAATGGTCTGCAAGCAAGCTCCTAAGGAGCTTCTCCACCTTCTATCTCCTTTGAACCCACAACCTTCTCATTTGAGATATCTTCAATACATTTCCAGGAGAAATATGGGTTCTGAGTGGCCTCCATCAGACACACCCTTATATTTGGATTGTCTGATTCTTAGAGTCCTTCCATTATTTGATGGCGGAAAAGGTTGCAGGCCTGTTGTACGTGTTTGCGGCCAGGACCCTTCAAAACTTGTTAATAGAAGTTCTAAGCTGCTTTTTTCTACTTCAAAGAACAAAACACATGTTTGCCTCTTCCAACAGGAAGAGTGTATGCTGGTGAAAATTGATATCCAATGTCGTGTTCAAGGGAATGTGGTTCTTGAGTGCATACATACGGATGATGACTTCAGTCATGAGGAGATGATGTTTAGTGTTATGTTTCACACAGCATTTGTGCGTTCAAACATATTGGTGATCAACCGTGATGAGGTTGATATTTTGTGGGATTCTCAGGATCAATTTCCCAGGGATTTTAACGCAGAGGTACTTTTTTTGGATTCCGATGCTGTTATGCCTAATCTAACCACAGTTCGGGCTAGTGAAGGTGCTAATGAGACAGCAACTGCTTCAGCGGCGGAATTTTATGAGGAATGTACAGCAGATGATCGTACCTACAAACAGGAGAGAAGGACGGATTCTGGTACCAATGCAGTGAAAGACAATGCTGTTGATGATGTGAAGTACACGCTTGATGAGAGTGTGGATTCTAATACTCATGAAGTCAAAGATATTGCTGTGGATGATGGGGAAATTAATAATACTTCTACGGTAGTCACTACTGATATGATTATGGAAATGAAGGATGTCAATGCCGACATGCATGAAGAACTGGAAGATATGGACAACAAATATGATGAATTTGGTGATGCAACAGAGCAGAAATTAGATTCTAAGGCAGGCCAGCAGGAGCATGATATTTCGAGACAAAAATCTGATAAAGTACCACATGTGACAAAAAAACAACTTTTGTCAAACTCGAAGCCAGTGGGAGATACATTTACAGCTAAGCAAAATATTAAGCAGCTTGAATCACGGGCTCCTCCGCCTCTGCCTCCGCCACCCCCAGGTAGCGCGCTGCCGCCGCCACCTCCCTTGGGCTCAAAAGGTTCAAATTCTGATCCAATAGGAAGAGGGCGTGGACTTTCACGTCCTACTGGGGGTGGTGCAGTAGCACCTCGACAATCCTCCTTAAAGCCTCTATATTGGAGTAAGATGAGAAGGGCAGTGCAGGGAAGTTTATGTGAAGAATTACAAAGACATGGAGAGCCTCAAATTGCCCCAGAATTTGACTTTCCAGAGCTTGAAAGCCTTTTCCTCGCAAATGTTCTTAAACCTGCTGGTTCAGGTGGTAAATCTGGAGATTGA 1881 0.4338 MALFRRFFYRKPLDRLVEISERVYVFDCCFSTDVLEEDGYKVYMGGIVAQLQDHFLDASFMVFNFREGEKRSQISDILSQYDMTVMEYPCQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYNGEQKTLEMVCKQAPKELLHLLSPLNPQPSHLRYLQYISRRNMGSEWPPSDTPLYLDCLILRVLPLFDGGKGCRPVVRVCGQDPSKLVNRSSKLLFSTSKNKTHVCLFQQEECMLVKIDIQCRVQGNVVLECIHTDDDFSHEEMMFSVMFHTAFVRSNILVINRDEVDILWDSQDQFPRDFNAEVLFLDSDAVMPNLTTVRASEGANETATASAAEFYEECTADDRTYKQERRTDSGTNAVKDNAVDDVKYTLDESVDSNTHEVKDIAVDDGEINNTSTVVTTDMIMEMKDVNADMHEELEDMDNKYDEFGDATEQKLDSKAGQQEHDISRQKSDKVPHVTKKQLLSNSKPVGDTFTAKQNIKQLESRAPPPLPPPPPGSALPPPPPLGSKGSNSDPIGRGRGLSRPTGGGAVAPRQSSLKPLYWSKMRRAVQGSLCEELQRHGEPQIAPEFDFPELESLFLANVLKPAGSGGKSGD 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2730 626 Coils Coil 435 455 - -
Alju06g2730 626 SUPERFAMILY Formin homology 2 domain (FH2 domain) 523 620 - -
Alju06g2730 626 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Alju06g2730 626 Gene3D Protein tyrosine phosphatase superfamily 10 204 IPR029021 -
Alju06g2730 626 MobiDBLite consensus disorder prediction 465 489 - -
Alju06g2730 626 MobiDBLite consensus disorder prediction 490 513 - -
Alju06g2730 626 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Alju06g2730 626 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Alju06g2730 626 Gene3D Formin, FH2 domain 561 626 IPR042201 -
Alju06g2730 626 SMART PTEN_C2_2 198 338 IPR014020 -
Alju06g2730 626 Gene3D - 205 336 - -
Alju06g2730 626 MobiDBLite consensus disorder prediction 517 540 - -
Alju06g2730 626 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 16 188 IPR029021 -
Alju06g2730 626 PANTHER FORMIN-J 1 622 - -
Alju06g2730 626 MobiDBLite consensus disorder prediction 465 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2730 Alju-ChrAlju06 54288645 54292456 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2730 537 622 FH2 protein (formin) Gene Family AT5G07740 57.955 2.85e-22 100