Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2718 ATGATTTCTCTCTCAGTTAACACTTGTTGCCGCTTTGCTTCATTCCTGGCTTTATCTGGTTTTCCATCTCGTTTATTTGTCTCTGCTACGCTGTTTCTCAGTATTATGGAAGCTGAAGAGATCGAAAGAGTTGGGAGGTTCCATTGTGTATCGAAATTGATATTATCCGCCATTTCTGGGGCTCTCACGGGATGCTTTGCCATTGCTGGAGCCATCACAGGAGCCATAGCTGGTGCACTAGCGAGTAGGGCTTCTGAGAGTGGTTTTCTCCGTGGAGCTACATTGGGGGCCATTGCTGGGGCTATAATATCTGTTGAGGTGTTAGAAGCTTCCCGTGCCTACTGGTGTTTAGAGCAAACTGGTTCAAGGAGCTCATCATCCATGGCAGATTTCATAGAGCAACTTGTTCGTGGGAGGCTTGTACAGGAACAATTTACACCAGCTATACTAACTGCTTACAGTTGGCAGGTTGGGGCTGCTAATACAGGCTATGATGAGATTCCTGAGGTTCATAGCTTAGTTTCGCCTAGAGGATTGTCTGGGGATTCGTTGAAGAAGTTACCACACCATGTTATCTTAAAGGACATGAAGCCGGAGAATCTCTGCTGCACAATATGTTTGCAGGATATTGAAGTAGGAGAAGTGGCGAGGAGCTTACCCCGATGTCGCCATTCGTTTCACTTGAACTGTGTGGACCGGTGGCTTGTCAAGAATGATTCATGTCCTGTCTGCAGACAATATGTATAG 747 0.4632 MISLSVNTCCRFASFLALSGFPSRLFVSATLFLSIMEAEEIERVGRFHCVSKLILSAISGALTGCFAIAGAITGAIAGALASRASESGFLRGATLGAIAGAIISVEVLEASRAYWCLEQTGSRSSSSMADFIEQLVRGRLVQEQFTPAILTAYSWQVGAANTGYDEIPEVHSLVSPRGLSGDSLKKLPHHVILKDMKPENLCCTICLQDIEVGEVARSLPRCRHSFHLNCVDRWLVKNDSCPVCRQYV 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2718 248 ProSiteProfiles Zinc finger RING-type profile. 203 245 IPR001841 -
Alju06g2718 248 Pfam Ring finger domain 203 245 IPR001841 -
Alju06g2718 248 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 168 248 IPR013083 -
Alju06g2718 248 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 39 247 IPR044523 -
Alju06g2718 248 SMART ring_2 203 244 IPR001841 -
Alju06g2718 248 SUPERFAMILY RING/U-box 184 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2718 Alju-ChrAlju06 54179371 54182727 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2718 36 248 C3H Transcription Factor Family AT1G74410 56.075 4.89e-76 228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2718 06 54179371 54182727 Alju06g2718 06 54179371 54182727 ECH