Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2712 ATGGAAGACGTTTGTGTTATGTATAACAAGGATGTAGATCGCATGAATTTGCCTCCTGGTTTTCGGTTTCACCCAACAGATGAAGAGCTAATCACTCACTATCTGTTCAACAAGGTCACTCTCACAAACTTCTCTGCTATAGCCATTGGAGAAGTGGATTTGAACAGGTCTGAGCCTTGGGATTTGCCACGGAAAGCAAAAATGGGAGAGAAAGAGTGGTATTTTTTCTGCGCGAGAGATAGAAAATACCCAACTGGTTTGAGAACTAACAGAGCAACAGAAGCAGGGTACTGGAAGGCCACAGGTAAAGACAGAGAGATTTACAGAGGAAAATCACTGGTGGGGATGAAGAAAACTCTGGTTTTTTACAGAGGAAGAGCACCAAAAGGAGAAAAAACCGATTGGGTCATGCATGAATTTAGATTGGATGGTAAATTCTCTGTTCACAACCTCCCCAAAACTGCAAAGAAAGAGTGGGTTATTTGCAGGTTGTTTAGGAAGAACTATGCTTGTAAGAAAACCCATATGAGATTTGAAGTTGAATCCACTGAAAATGGATTGGGTTCTTCAGTTTTATTACCTCCTCTGGCGGATTCTTCTCATTTCATTGGTAAAACAGAGCCCAAAGTAACAGAGTCAGCGTACGTCTCCTGCTTCTCCAATGCAATTGATGATCAAAGAAACCAAGAAGGAATCTTTGATTCCTTAGGAAATTCCCTTTTGAGGATTCCTTCAAATTCTTCACAAATCCTGCCCAGAATCCCTCTGTATTCTGCTCAACCTTATGAAGCTCATGGAAATTTCTGTAGGCAGAACCAGAAGAACCTGCTTGAGGCTTTTCTTGAAAACCATGGATCAAACATGAGGAATGGTTTCAATTCCAAGGGAGAAAAATTTGTGAGTGTTTCACAAGAAACAAGTCTCACCACTGATATGAATCCTGAAATTTCTTCTGTGATGGTATCAAGTGTTGGTGTTGGTACGAGGGTTTTTGAGAATAATAATCAGCAAAATCTCTCTGCTTCCTCTGCTTTTCCAATGGACCGTGATGGCTTGTGGAATTACTAA 1068 0.4082 MEDVCVMYNKDVDRMNLPPGFRFHPTDEELITHYLFNKVTLTNFSAIAIGEVDLNRSEPWDLPRKAKMGEKEWYFFCARDRKYPTGLRTNRATEAGYWKATGKDREIYRGKSLVGMKKTLVFYRGRAPKGEKTDWVMHEFRLDGKFSVHNLPKTAKKEWVICRLFRKNYACKKTHMRFEVESTENGLGSSVLLPPLADSSHFIGKTEPKVTESAYVSCFSNAIDDQRNQEGIFDSLGNSLLRIPSNSSQILPRIPLYSAQPYEAHGNFCRQNQKNLLEAFLENHGSNMRNGFNSKGEKFVSVSQETSLTTDMNPEISSVMVSSVGVGTRVFENNNQQNLSASSAFPMDRDGLWNY 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2712 355 Gene3D NAC domain 26 171 IPR036093 GO:0003677|GO:0006355
Alju06g2712 355 ProSiteProfiles NAC domain profile. 17 167 IPR003441 GO:0003677|GO:0006355
Alju06g2712 355 FunFam NAC domain-containing protein 100-like 26 171 - -
Alju06g2712 355 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
Alju06g2712 355 SUPERFAMILY NAC domain 7 167 IPR036093 GO:0003677|GO:0006355
Alju06g2712 355 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2712 Alju-ChrAlju06 54125419 54126676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2712 15 355 NAC Transcription Factor Family AT5G07680 54.810 3.63e-116 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju06g2712 NAM 5.2e-39 No_clan