Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2711 ATGGAGAACATTTTTGTGCTGTCCAACAAGGAAGAAGGTCAGATTGATTTGCCTCCTGGCTTTCGGTTTCACCCAACAGATGAAGAGCTGCTCACTTATTATCTGTACAAGAAGACCAATAATGCCAACTTCTCTGCTATAGCCATTGCAGAAGTGGATATACAAAAGTTTCAGCCTTGGGATTTGCCGTGGAAAGCGAAAATGGGAGAGGATGAGTGGTATTTTTTCTGCCTGAGAGACAGAAAATACCAAACTGGTTTGAGAACCAACAGAGCCACTGAAGCTGGGTACTGGAAATCCACAGGGAAAGATGGGGAGATTTACAGAGGAAAATGCCTGATAGGGAAGAAGAAAACTCTGGTTTTCTACATGGGAAGAGCACCAACTGGAGAAAAAACCAACTGGGTCATGCATGAATACAGATTAGAAGGAAACTTCTCTGTCCACAACTCCTCTAGACCTACAAAGAACGAGTGGGTGATTTGCAGGGTGTTTGAGAAGACTTCAGGGAGCAAGAAAACCCACATTTCTGATATAAAGAGGTCTAAATCCATTGGAAATGGATTGGGTTCTTCTTCAGTATCACTTTCTCCACCTGTCATCGCAGATCATTACATGGGCTCAATGGAACCTACGATAAGTACTGATTCGGCACATGTGCCCTGCTTCTCCTCTCTGTTATGTGATGATGAAAACGACCAAGCAGGGATTTTTAATTCTGCAGAAAACTCCCTTTTGGGGATTTGCTCAAATCCTCAAGAATTTTTGCCAACAATGCCTCTTCATGATTGGTCGTATTCTGCTGAACCCATTATTGAAGCTCCGATGAATCTGCCATTATTGTCAGATTCTGCATTGACTGTGCAGGAACAGAACTTTCTTGATGGTGTTTTTGAGAACCGTGGTTTTATGGCCGAGGCAGAGCAAATGCTGCGTGTTTCTTATGAAACGAATCTGACCAACACTGACTTGAATCCAGAGATTTCTTCTGTGATATCAAGTTTTGGTAATCAGCAGAACCCATCTTCTTCTTCTGGAGCATCATTGGACCTTGATAACTTCAGGAGTTACTAG 1074 0.4274 MENIFVLSNKEEGQIDLPPGFRFHPTDEELLTYYLYKKTNNANFSAIAIAEVDIQKFQPWDLPWKAKMGEDEWYFFCLRDRKYQTGLRTNRATEAGYWKSTGKDGEIYRGKCLIGKKKTLVFYMGRAPTGEKTNWVMHEYRLEGNFSVHNSSRPTKNEWVICRVFEKTSGSKKTHISDIKRSKSIGNGLGSSSVSLSPPVIADHYMGSMEPTISTDSAHVPCFSSLLCDDENDQAGIFNSAENSLLGICSNPQEFLPTMPLHDWSYSAEPIIEAPMNLPLLSDSALTVQEQNFLDGVFENRGFMAEAEQMLRVSYETNLTNTDLNPEISSVISSFGNQQNPSSSSGASLDLDNFRSY 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2711 357 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
Alju06g2711 357 ProSiteProfiles NAC domain profile. 17 167 IPR003441 GO:0003677|GO:0006355
Alju06g2711 357 SUPERFAMILY NAC domain 9 167 IPR036093 GO:0003677|GO:0006355
Alju06g2711 357 MobiDBLite consensus disorder prediction 332 357 - -
Alju06g2711 357 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 239 - -
Alju06g2711 357 Gene3D NAC domain 26 171 IPR036093 GO:0003677|GO:0006355
Alju06g2711 357 FunFam NAC domain-containing protein 100-like 26 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2711 Alju-ChrAlju06 54119716 54120956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2711 15 357 NAC Transcription Factor Family AT5G07680 49.271 1.81e-101 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju06g2711 NAM 6.7e-38 No_clan