Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2687 ATGGAAGGAGGTGATGATCTCCACCACCACCACCACCACCACCACCGTCCGACTTTTCCGTTTCAGCTCCTCGAGAAGAAAGAAGATCAAGAAGCTGCTCCTTGCTCCGCCTCCTCTTCACCTTACCCTTCCTTAGCCATCTCTGCTGAGCCGGCCTCCTCCAATAATCCAAACCGATCAAACCAAATCATCGCCTCGGCTGAACCGGCCTCCAATAAGAAGCCTCCGCCTAAGAGAACCTCCACCAAGGACCGCCACACCAAGGTCGACGGGCGTGGCCGTCGCATTCGAATGCCTGCCCTCTGTGCCGCCCGAGTCTTCCAGCTCACCCGCGAGCTCGGCCACAAGTCTGACGGCGAAACCATCGAGTGGCTGCTTCAGCAGGCCGAGCCAGCCGTCATCGCCGCCACCGGCACCGGAACCATCCCGGCTAACTTCACTTCGCTTAACATATCCTTGAGAAGCTCAGGATCCACTATGTCGGTCCCGTCTCAGCTAAGATCCTCCTACTTCAATCCCAACTTCTCCGTCCAACAGCGCCGGAGTCTATTTCCCGGAATTGGTTTGTCTTCCGATAATGCCGCCGCCGCCTCTACGCTTCTTAATTTTCAATCCAGTAACCTAACCACGAACCTCTTGCAAGCCAAGCAAGAGCTTCGCGACGGGGTGGGCCCGCCTTTGGCTGCTACGACGTTGGATTTGTCGCCGGAGACCCCAGAAGAAGGGATGGGGAGAAAACGGCGGCCGACAGAGCAGGATTTGTCGTCAACGCAGCATCAAATGGGGAGTTATTTGTTGCAGTCAAGCGCGGGGGCGATCCCGGCGAGCCATGCTCAGATTCCGGGCAACATTTGGATGGTGACGAATTCAAGTAACCAGGTTATGAGCGGTGATCCTATATGGACATTCCCATCGGTAAACAACAGTGGATTGTATAGGGGAAGCATGTCAAGCGCGTTACATTTCATGAACTTCCCCACACCTATGGCCTTATTGCCCAGTCAACAATTAGGTTTGTCGGGGCTAAGCGGTGGCGGTGGAGGCGGTGGCGGCGCTGCTTCAGGCGGCAACAACATTAACGAAGGACATTTGAGTATGCTGGCAGGGCTGAGCCCGTACCGGCCGGTGATCGGGCTGTCAGAGTCTCAGGCGAGCGGGTCCCAATCACATCACTGTGGCGGAGGCGGAGGCGACGATCGGCACGACGCCGCCATTCATAGAGGATCATCGTCATCATGA 1239 0.5658 MEGGDDLHHHHHHHHRPTFPFQLLEKKEDQEAAPCSASSSPYPSLAISAEPASSNNPNRSNQIIASAEPASNKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSVPSQLRSSYFNPNFSVQQRRSLFPGIGLSSDNAAAASTLLNFQSSNLTTNLLQAKQELRDGVGPPLAATTLDLSPETPEEGMGRKRRPTEQDLSSTQHQMGSYLLQSSAGAIPASHAQIPGNIWMVTNSSNQVMSGDPIWTFPSVNNSGLYRGSMSSALHFMNFPTPMALLPSQQLGLSGLSGGGGGGGGAASGGNNINEGHLSMLAGLSPYRPVIGLSESQASGSQSHHCGGGGGDDRHDAAIHRGSSSS 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2687 412 MobiDBLite consensus disorder prediction 33 68 - -
Alju06g2687 412 MobiDBLite consensus disorder prediction 381 412 - -
Alju06g2687 412 MobiDBLite consensus disorder prediction 1 93 - -
Alju06g2687 412 MobiDBLite consensus disorder prediction 224 258 - -
Alju06g2687 412 MobiDBLite consensus disorder prediction 18 32 - -
Alju06g2687 412 Pfam TCP family transcription factor 80 207 IPR017887 -
Alju06g2687 412 ProSiteProfiles TCP domain profile. 82 136 IPR017887 -
Alju06g2687 412 MobiDBLite consensus disorder prediction 239 253 - -
Alju06g2687 412 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 29 365 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2687 Alju-ChrAlju06 53899459 53900697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2687 73 402 TCP Transcription Factor Family AT3G47620 44.819 4.70e-65 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Alju06g2687 TCP 3.8e-38 No_clan