Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2681 ATGTCTAGCAGAAGAACTTCATCAAGACTCTCAGAGAATGAGATTAATGAGATTGTTTCCAGGTTACAGGCAGTACTGCCACGGCTGAACCAAAGAAACAACTCAAGGGCATCAGTATCGAAGATAGTGAAAGAAGCATGCAGTCACGTGAAGAAGCTTCAGAAAGAGGTGGATGAGCTTAGTGAGAAAGTAGCTGGTCTCATGGATTCTGTGGATATCACTCAAATTGACGAACAAACCCTTCGAAGTATTCTTCAACATTAG 264 0.4205 MSSRRTSSRLSENEINEIVSRLQAVLPRLNQRNNSRASVSKIVKEACSHVKKLQKEVDELSEKVAGLMDSVDITQIDEQTLRSILQH 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2681 87 Gene3D - 3 84 IPR036638 GO:0046983
Alju06g2681 87 Coils Coil 43 70 - -
Alju06g2681 87 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 53 IPR011598 GO:0046983
Alju06g2681 87 PANTHER DNA BINDING PROTEIN 1 86 IPR044172 -
Alju06g2681 87 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 69 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2681 Alju-ChrAlju06 53847181 53847742 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2681 7 85 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G39860 38.750 6.11e-16 64.7