Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2668 ATGACGAAAGAAGAGCTTCAGAACGAAAATGATGACATGCTTATCGATGGATATGAACCTGAAGCGCCTGGGCAAAAGAAGAAAAGTCACGTTCCGAGCGAGTTTAATCCGGATCACCTTAAAGTGTTTTACGGAAAGCTATTTCCTTATGCTGATTTTTTTAGATGGATGTCTTACGGCAATGATGGGAAGCATCCGGGTTGTGATCCCTCTTACATCAGCCGGAGGGAATTTTCATTCTCGCTTGACAACGATATATTTCTACGATTCCAATCCTTCCACAGTGCTGCGGAGCTTGAAAACTTTATCAAAGAGAAATGCCCATTTAAGGTCGATATCGGACCTGTGTATAGCGTGGAGCCCACAAAAAGGCATGCCTATGCTCAGAGTGGCGATAATGTTTTTGCTCCAGTTGAGAGAGAGCTAATTTTTGATATTGATATGACAGATTATGACGATGTTAGATACTGCTGCACTGGTGCTGATGTTTGCTTGAATTGCTGGCCACTGATGACTATAGCTATTAAAGTGCTTGATACCGCCTTAAGAGATGATTTTGGCTTTAAACACATTCTATGGGTTTATAGTGGCCGCCGTGGTGTTCACTGTTGGGTCTGTGATGGGAAGGCAAGAAGGTTGACAAATGAGCAGAGAGCAGCGATTGCTGACTATTTTCGTGTCTACAAGGGAAACGAGAATAGTCATAAGAAGGTTTCATTGATGGGTCAAGCTCTTCATCCTTTCCTGGTGAGAGCATACACTGAAGTTCTTAAAGAGTTTTTTGAGAAAGGACTATTAATAAGTCAAACTTTACTTTCTACCGAAGAGAGATATGAGATGGTCTTAGAGTTGATTCCAGATGCAGCTATTGCTTCGGAACTTAGGGGTAGATGGCAAGATAATAGGCGGTCTTCAAGTGCAAAAGAAGACATTAATGTTGTTCGATGGGAACAGCTCAAACATTTGGTGTCGAAGAATAAGGCACCAGGACTGCGAAGGTGTGTTGAAGAGATTGTGTTCTCTTTTACTTACCCTAGGCTAGATATGGAGGTTTCGAAGCACATGAATCACCTGCTTAAAGCTCCATTCTGTGTACACCCAAAAACAGGTCGCATTTGTGTCCCTATTGATCCAAATCACTGTGAGCAGTTTGATCCTACCGCAGTACCTACTCTTTCACAGCTTTTAGAAGAGCTTAACGAAAGAGGTGCAAATGATGATTTAGATGATGAATGGACAGGAACTTCACTTGAGGGCGCCGTCAGCTATTTCAGAACGTCATTCTTACAGCCTCTACTAAAAGCTTGCAAGGAGGAGATAGAAAGTTCCTACAATGCAAAATTGCAGCAGTCAAAAACCTCCTTTAGCTGGTAA 1374 0.4229 MTKEELQNENDDMLIDGYEPEAPGQKKKSHVPSEFNPDHLKVFYGKLFPYADFFRWMSYGNDGKHPGCDPSYISRREFSFSLDNDIFLRFQSFHSAAELENFIKEKCPFKVDIGPVYSVEPTKRHAYAQSGDNVFAPVERELIFDIDMTDYDDVRYCCTGADVCLNCWPLMTIAIKVLDTALRDDFGFKHILWVYSGRRGVHCWVCDGKARRLTNEQRAAIADYFRVYKGNENSHKKVSLMGQALHPFLVRAYTEVLKEFFEKGLLISQTLLSTEERYEMVLELIPDAAIASELRGRWQDNRRSSSAKEDINVVRWEQLKHLVSKNKAPGLRRCVEEIVFSFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRICVPIDPNHCEQFDPTAVPTLSQLLEELNERGANDDLDDEWTGTSLEGAVSYFRTSFLQPLLKACKEEIESSYNAKLQQSKTSFSW 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2668 457 PANTHER DNA PRIMASE SMALL SUBUNIT 27 442 - -
Alju06g2668 457 NCBIfam eukaryotic-type DNA primase catalytic subunit PriS 41 397 IPR014052 GO:0003896|GO:0006269
Alju06g2668 457 MobiDBLite consensus disorder prediction 1 33 - -
Alju06g2668 457 Pfam DNA primase small subunit 144 377 IPR002755 GO:0003896|GO:0006269
Alju06g2668 457 CDD AE_Prim_S 49 386 IPR014052 GO:0003896|GO:0006269
Alju06g2668 457 Gene3D DNA primase, PRIM domain 25 438 - -
Alju06g2668 457 FunFam DNA primase 27 438 - -
Alju06g2668 457 SUPERFAMILY Prim-pol domain 35 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2668 Alju-ChrAlju06 53725377 53730486 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2668 1 457 Core DNA Replication Machinery Family AT5G41880 62.174 0.0 622