Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2667 ATGGAGGTTGCTTTAGGAAGATCTGATCATGAAAGTAGAGTCAAAGAAGAGAAGACGACTGAATCTGGTGGCCCTGGTGAAGAAGATCATCCAAAACAAGAGATTGATATTGAGGTGCCACCAGTGGACGATACTTGTGGAGCAATTGCATCTTCAACTAAAAAGGAAGAGGTGGAAGAGCTAGAAAGTGCAAAAACGGAAATGGGAGAGGTGAGAGAAGAAAACCAAAGGCTAAAGCAGTGTTTGGATAGGGTTATGAAGGATTACAGGACACTAGAAATGAAATTCAAACATATCTTTCAAAAAGAAACCAAACATCAATCCACCACTACATGTTCTGAATCTGATGATCATGTTTCTCTGAGCCTTGGAAGAGTTATTTGCAGCAATAACAACAATGATAATGCAAGAACTAACGATGATGATCACCAGAAAAGAAAAGCTTTGAAAGCATTATTATTGAAGGATAATAATGCTGATGATGATGAAGAAGAGGACTTGGCTCTTGGATTGGACTGCAAATTTGAAACATCCAAGTCAGGAAGCATAACTACTAATAATAACAATAATTCGCCAAATATAATTAATCCAAGCCCTACCAATAGTTCTCATCAAGAGCCAGTCAATAATGAAAGTAAAGCACTCAAGACAAGCAGAGATAGTTATTCTGGAGAAGATGAAGTTTCCCAACACAATCCTCCCAAGAGAGCTAGGGTTTGTGTCAGAGCAAGATGTGATGCTCCAACTATGAGCGATGGATGTCAATGGAGAAAATATGGACAAAAAATCTCTAAAGGAAATCCTTGTCCTAGAGCATATTATCGTTGTACAGTCGCACCCTCATGCCCCGTGAAAAAACAGGTGCAGAGATGTGCAGAGGATATGTCGGTTTTAGTAACAACTTATGAGGGAATCCACAACCACCCTCTTCCTCTCTCAGCCACCGCCATGGCTTCCACTACTTCCGCCGCAGCTTCCATGCTTTTGTCTGCCTCATCATCCTCTTCGTTGGCCGCCGCCACGTCATCATCATCTGATCATCTCTACGGCCTGAATTTCTCCTTGTCATCAGATGGTTCCCTCAGCAGATCATCAAAACCATCATTATATTTCTCCAATAATCCTTCTTCACTCTCATCATTATCATCATTGCCTTCTCACCCAACAATCACTCTTGACCTCACCACCAACTCAGCAGCCTCTAGATTCGTCACCTCATCAAACTACAACCCATCTCCAAGATCGTCGTCGTCGTCATTCCCTTCTTCCACAAGTCTCAACTTTAGTTCTCAAAACAATAATAATTTTCTCAGCTATAACAGGAATGTTTTCAGCTCCATGAACCTTGCAAGGTCGACGACAATGGATAATAATATCTACAGGCTGCCTTACGTACAAAAGAACAGTGTTATGAATATCCCAACTCATCACCATTATCCTCCTCCTCCTCAACCTGCTGCTCTGCCGGATAGTATTGCCGCCATCGCGGCGGACCCAAAGTTTCAGTCGGCTTTGGCGGTGGCGCTTAGTACAATTATTGGCACCGGAGTAAGTGGCATTGGAAGCAGCAGCCAAGACCAAGGCAATCATGGCGGCACCGGAGAAAACTTGCCTCAGAAAGTGAAATGGGGAGAACTGTTTCCAGCATTATGA 1653 0.4289 MEVALGRSDHESRVKEEKTTESGGPGEEDHPKQEIDIEVPPVDDTCGAIASSTKKEEVEELESAKTEMGEVREENQRLKQCLDRVMKDYRTLEMKFKHIFQKETKHQSTTTCSESDDHVSLSLGRVICSNNNNDNARTNDDDHQKRKALKALLLKDNNADDDEEEDLALGLDCKFETSKSGSITTNNNNNSPNIINPSPTNSSHQEPVNNESKALKTSRDSYSGEDEVSQHNPPKRARVCVRARCDAPTMSDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVKKQVQRCAEDMSVLVTTYEGIHNHPLPLSATAMASTTSAAASMLLSASSSSSLAAATSSSSDHLYGLNFSLSSDGSLSRSSKPSLYFSNNPSSLSSLSSLPSHPTITLDLTTNSAASRFVTSSNYNPSPRSSSSSFPSSTSLNFSSQNNNNFLSYNRNVFSSMNLARSTTMDNNIYRLPYVQKNSVMNIPTHHHYPPPPQPAALPDSIAAIAADPKFQSALAVALSTIIGTGVSGIGSSSQDQGNHGGTGENLPQKVKWGELFPAL 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2667 550 MobiDBLite consensus disorder prediction 181 236 - -
Alju06g2667 550 MobiDBLite consensus disorder prediction 181 217 - -
Alju06g2667 550 MobiDBLite consensus disorder prediction 1 39 - -
Alju06g2667 550 Pfam WRKY DNA -binding domain 252 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju06g2667 550 MobiDBLite consensus disorder prediction 218 233 - -
Alju06g2667 550 Coils Coil 54 81 - -
Alju06g2667 550 Gene3D WRKY domain 235 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju06g2667 550 MobiDBLite consensus disorder prediction 405 424 - -
Alju06g2667 550 ProSiteProfiles WRKY domain profile. 245 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju06g2667 550 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 34 524 IPR044810 GO:0003700
Alju06g2667 550 MobiDBLite consensus disorder prediction 1 43 - -
Alju06g2667 550 FunFam probable WRKY transcription factor 31 235 312 - -
Alju06g2667 550 SMART WRKY_cls 250 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju06g2667 550 SUPERFAMILY WRKY DNA-binding domain 243 311 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2667 Alju-ChrAlju06 53717082 53720491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2667 60 514 WRKY Transcription Factor Family AT1G18860 39.293 1.13e-75 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju06g2667 WRKY 4e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2667 06 53717082 53720491 Alju13g1475 13 33289548 33293378 ECH
Alju06g2667 06 53717082 53720491 Alju06g2667 06 53717082 53720491 ECH