Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2664 ATGAGTTCATTGCGAAGAAAATGCCCCAGCTTCCTCGCCGTTACTTCTTCGCTGTCAATTGAAATCCCTGCTGAAGAACCGATCAACACGAACCGTGATTCTTCATCTGGTGACTTGATCATTGAGGTTGTAAACATTAGTACCCTGGGGAAGAGCAAAAACAGGGTATTGATCATAAATGCGTTTATCTCTCCGAACAATTTTCCTTTTGGGCTGTGGACGTCCCTGAAAAGCAACCTCCGACTGAACATCGGTCCTGAACTTCACGGCAGTGAAAGAATCTCAATATTCAAGTGTTATGGCAAGGGCGGGGTTTGTAGTTGTGCAGGTTCAGTCCCACCACAAGAGTATATCACACCAGATGATGAACATGTCCTTGAAGAGGAAAACATTGTAAAACAGCAAGCAACAGAAGATATGGTAGACCCAACTGTTTCTGTTCAGATACGTGGCCTTGTAAAGACATACCCTGGTGCATTGAAAGTTGGATGCTTCTGTAAATGCGAAAAAACTACTCCTTACAATGCTGTAAAGGGTTTATGGATTAACTTTGCGAAGGATCAGTTGTTTTGTCTCCTGGGACCCAATGGAGCTGGTAAAACCACTGTTATTAATTGTTTGACCGGAATAACCCCAGTAACTGATGGAAATGCATTGATTTATGGACATTCCATAAGAAGCTCCGCTGGCATGTCAAACATTCAAAAGCATACAGGTGTCTGTCCTCAGTTTGATATCTTATGGTATGCATTGTCTGGTGAAGAACACCTCCATCTCGTTGCTAGCATTGAAGGCTTATCCCCAACTTCTATCAAATCGATTACTCAGAAGTCATTAGCAGAAGTGAGACTCACTGAGTCAGCCAAAGTGAGAGTTAAAAGTTACAGTGGGGGAATGAAACGTCGTCTTAGTGTTGCAATTTTCCTCATTGGCGATCCTAAGTTGGTAATTATGGATGAACCGACGACTGGCATGGATCCAATAACAAGGAGGCATGTGTGGGACATAATTGAAAATACTAAACGTGGGCAAGCTATTGTCCTCACAACACACTCGATGGAAGAGGCTGACATTTTAAGCGACCGCATAGGAATCATGGCAAAAGGAAGATTTCGCTGCATTGGCACCTCAGTAAGGTTGAAGTCACGTTTTGGCACTGGTTTTATTGCTAATATCAACTTCCATGGGAACAATTATGAACACAGTCCTGCCATTAGAGATGTAACTTCCCCAAGAAATCATGAGACAGTGAAGCAATTCTTTAAGAATAATTTAGATGTGGAGCCAAAAGAAGAGAATAATTCCTACCAAACTTAA 1317 0.4222 MSSLRRKCPSFLAVTSSLSIEIPAEEPINTNRDSSSGDLIIEVVNISTLGKSKNRVLIINAFISPNNFPFGLWTSLKSNLRLNIGPELHGSERISIFKCYGKGGVCSCAGSVPPQEYITPDDEHVLEEENIVKQQATEDMVDPTVSVQIRGLVKTYPGALKVGCFCKCEKTTPYNAVKGLWINFAKDQLFCLLGPNGAGKTTVINCLTGITPVTDGNALIYGHSIRSSAGMSNIQKHTGVCPQFDILWYALSGEEHLHLVASIEGLSPTSIKSITQKSLAEVRLTESAKVRVKSYSGGMKRRLSVAIFLIGDPKLVIMDEPTTGMDPITRRHVWDIIENTKRGQAIVLTTHSMEEADILSDRIGIMAKGRFRCIGTSVRLKSRFGTGFIANINFHGNNYEHSPAIRDVTSPRNHETVKQFFKNNLDVEPKEENNSYQT 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2664 438 Gene3D - 133 398 IPR027417 -
Alju06g2664 438 FunFam ABC transporter A family member 2 137 401 - -
Alju06g2664 438 SMART AAA_5 186 370 IPR003593 GO:0016887
Alju06g2664 438 ProSitePatterns ABC transporters family signature. 295 309 IPR017871 GO:0005524|GO:0016887
Alju06g2664 438 CDD ABC_subfamily_A 147 381 - -
Alju06g2664 438 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 147 393 IPR003439 GO:0005524
Alju06g2664 438 Pfam ABC transporter 182 322 IPR003439 GO:0005524
Alju06g2664 438 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 64 418 IPR026082 GO:0016020|GO:0055085|GO:0140359
Alju06g2664 438 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 384 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2664 Alju-ChrAlju06 53682724 53685593 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2664 191 392 Calmodulin-binding Proteins AT2G36910 20.444 2.55e-07 51.2