Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2623 ATGTCTCGATCACTCTCCGCCACCTCCACTGATGGCGGCGATGCTTCTTCGCCCGCCCCCGCCGGTGAGATCATGTTGTTCGGTGTTAGAGTCGTCGTCGATTCCATGAGGAAGAGTGTGAGTTTGAACAATCTCTCGCAGTACGAGCATCCTCAGGATGGCTCGAATAACAAGGAAGATGTTCCCGCCGCCGGTTATGCCTCCGCCGACGATGCTGTTGTTCATAATTCCAGCAAGCACCGCGAGCGCGAGCGCAAACGAGGGGTTCCATGGACGGAGGAAGAACACAGGCTGTTCTTGCTGGGATTGCAGAAGGTAGGGAAGGGCGATTGGAGAGGGATCTCAAGGAACTATGTGAAAACAAGGACTCCTACACAGGTTGCGAGCCATGCTCAGAAGTACTTCCTTCGAAAATGCAACCTCAATCGTCGACGTCGTAGATCCAGCTTGTTTGACATGACTACGGACTCGGTTTCAGCAAATCCAGTGGAAGAACTGATCCAGCCTCAAGATACTATGCCTCATTCACATCTTGTGCACCCTGCATCCTCTGAAACCTGCAACATCAATGGATTTTCAATGATGCCATCATATCCAATGGCTGTTGGGGCTGGAGTGATTTCATTCCCGGGCAGGAATCTGGTGGAGAACCTCTCTCTGGGGCATGGAAATTATAAACACAATGGTCCAATTCATTCTGTTCCAGATCCAAAAGCTTCTGCTATGTTTGATGCTGCCTTGAGTTTGAGCTCTTCTGTTGATCTACCAACTCTGTCTCTTGGACTATCCTTGTCGTCTGATCAGAGGAAAAAAACATCAAGGCACTCGAATTTACATGCAGTGCCATGTTACAACAATGGAGAAGGCATCATAAGCGTTGCTTGA 885 0.4949 MSRSLSATSTDGGDASSPAPAGEIMLFGVRVVVDSMRKSVSLNNLSQYEHPQDGSNNKEDVPAAGYASADDAVVHNSSKHRERERKRGVPWTEEEHRLFLLGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRKCNLNRRRRRSSLFDMTTDSVSANPVEELIQPQDTMPHSHLVHPASSETCNINGFSMMPSYPMAVGAGVISFPGRNLVENLSLGHGNYKHNGPIHSVPDPKASAMFDAALSLSSSVDLPTLSLGLSLSSDQRKKTSRHSNLHAVPCYNNGEGIISVA 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2623 294 SMART sant 87 137 IPR001005 -
Alju06g2623 294 MobiDBLite consensus disorder prediction 1 15 - -
Alju06g2623 294 MobiDBLite consensus disorder prediction 1 20 - -
Alju06g2623 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 139 IPR017930 -
Alju06g2623 294 PANTHER TRANSCRIPTION FACTOR KUA1 22 222 - -
Alju06g2623 294 Pfam Myb-like DNA-binding domain 90 135 IPR001005 -
Alju06g2623 294 CDD SANT 90 135 IPR001005 -
Alju06g2623 294 ProSiteProfiles Myb-like domain profile. 83 135 IPR001005 -
Alju06g2623 294 ProSiteProfiles SANT domain profile. 86 139 IPR017884 -
Alju06g2623 294 Gene3D - 89 141 - -
Alju06g2623 294 FunFam transcription factor MYB1R1 89 140 - -
Alju06g2623 294 NCBIfam myb-like DNA-binding domain, SHAQKYF class 86 138 IPR006447 GO:0003677
Alju06g2623 294 MobiDBLite consensus disorder prediction 69 89 - -
Alju06g2623 294 MobiDBLite consensus disorder prediction 74 89 - -
Alju06g2623 294 SUPERFAMILY Homeodomain-like 85 137 IPR009057 -
Alju06g2623 294 MobiDBLite consensus disorder prediction 44 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2623 Alju-ChrAlju06 53256080 53257709 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju06g2623 Myb_DNA-binding 5.4e-11 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2623 06 53256080 53257709 Alju13g1519 13 33568609 33570159 CCT